Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 RPS2P52-201ENST00000469610 820 ntBASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRTM1Q9HBL6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 GUSBP6-202ENST00000438529 1198 ntBASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRTM1Q9HBL6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 ZNF815P-204ENST00000434898 1737 ntBASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRTM1Q9HBL6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 NCF1B-203ENST00000435988 1254 ntBASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 TSPY6P-201ENST00000448518 926 ntBASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 MIR4758-201ENST00000577688 71 ntBASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRTM1Q9HBL6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRTM1Q9HBL6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms