Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.99■■□□□ 1.27
RNF41Q9H4P4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF41Q9H4P4 KRT16P1-201ENST00000399124 1418 ntBASIC22.99■■□□□ 1.27
RNF41Q9H4P4 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
RNF41Q9H4P4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
RNF41Q9H4P4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF41Q9H4P4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC22.98■■□□□ 1.27
RNF41Q9H4P4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.98■■□□□ 1.27
RNF41Q9H4P4 CD177P1-201ENST00000606252 935 ntBASIC22.98■■□□□ 1.27
RNF41Q9H4P4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC22.98■■□□□ 1.27
RNF41Q9H4P4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF41Q9H4P4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF41Q9H4P4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF41Q9H4P4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC22.98■■□□□ 1.27
RNF41Q9H4P4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF41Q9H4P4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF41Q9H4P4 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF41Q9H4P4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF41Q9H4P4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
RNF41Q9H4P4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
RNF41Q9H4P4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
RNF41Q9H4P4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF41Q9H4P4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF41Q9H4P4 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.96■■□□□ 1.27
RNF41Q9H4P4 AFG3L1P-217ENST00000557444 2447 ntBASIC22.96■■□□□ 1.27
RNF41Q9H4P4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF41Q9H4P4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF41Q9H4P4 FAM197Y1-201ENST00000421178 764 ntBASIC22.96■■□□□ 1.27
RNF41Q9H4P4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RNF41Q9H4P4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF41Q9H4P4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF41Q9H4P4 CR392000.1-201ENST00000624770 1228 ntBASIC22.96■■□□□ 1.27
RNF41Q9H4P4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF41Q9H4P4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
RNF41Q9H4P4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RNF41Q9H4P4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF41Q9H4P4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.95■■□□□ 1.27
RNF41Q9H4P4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.95■■□□□ 1.27
RNF41Q9H4P4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
RNF41Q9H4P4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF41Q9H4P4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
RNF41Q9H4P4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF41Q9H4P4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
RNF41Q9H4P4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.95■■□□□ 1.26
RNF41Q9H4P4 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.95■■□□□ 1.26
RNF41Q9H4P4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC22.95■■□□□ 1.26
RNF41Q9H4P4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC22.95■■□□□ 1.26
RNF41Q9H4P4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.95■■□□□ 1.26
RNF41Q9H4P4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.95■■□□□ 1.26
RNF41Q9H4P4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.95■■□□□ 1.26
RNF41Q9H4P4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.95■■□□□ 1.26
RNF41Q9H4P4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.95■■□□□ 1.26
RNF41Q9H4P4 AC131212.4-201ENST00000623606 975 ntBASIC22.95■■□□□ 1.26
RNF41Q9H4P4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
RNF41Q9H4P4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
RNF41Q9H4P4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
RNF41Q9H4P4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms