Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RTFDC1Q9BY42 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC23.73■■□□□ 1.39
RTFDC1Q9BY42 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.73■■□□□ 1.39
RTFDC1Q9BY42 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTFDC1Q9BY42 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTFDC1Q9BY42 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RTFDC1Q9BY42 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 PTK2-216ENST00000519881 863 ntTSL 3 BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RTFDC1Q9BY42 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.71■■□□□ 1.39
RTFDC1Q9BY42 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RTFDC1Q9BY42 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTFDC1Q9BY42 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.71■■□□□ 1.39
RTFDC1Q9BY42 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTFDC1Q9BY42 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RTFDC1Q9BY42 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
RTFDC1Q9BY42 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTFDC1Q9BY42 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.71■■□□□ 1.39
RTFDC1Q9BY42 AL136038.3-201ENST00000561909 1096 ntBASIC23.71■■□□□ 1.39
RTFDC1Q9BY42 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC23.71■■□□□ 1.39
RTFDC1Q9BY42 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
RTFDC1Q9BY42 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTFDC1Q9BY42 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTFDC1Q9BY42 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RTFDC1Q9BY42 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RTFDC1Q9BY42 CD37-204ENST00000535669 1674 ntTSL 2 BASIC23.7■■□□□ 1.39
RTFDC1Q9BY42 KRT8P45-201ENST00000414328 1447 ntBASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 CD81-212ENST00000526072 1172 ntTSL 5 BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RTFDC1Q9BY42 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 IPPK-202ENST00000375522 882 ntTSL 3 BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 TPM4P1-201ENST00000436100 807 ntBASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 AP001271.2-201ENST00000624018 1556 ntBASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTFDC1Q9BY42 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RTFDC1Q9BY42 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.68■■□□□ 1.38
RTFDC1Q9BY42 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.68■■□□□ 1.38
RTFDC1Q9BY42 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC23.68■■□□□ 1.38
RTFDC1Q9BY42 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTFDC1Q9BY42 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RTFDC1Q9BY42 AL450487.1-201ENST00000426799 995 ntBASIC23.68■■□□□ 1.38
RTFDC1Q9BY42 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.68■■□□□ 1.38
RTFDC1Q9BY42 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC23.68■■□□□ 1.38
RTFDC1Q9BY42 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC23.68■■□□□ 1.38
RTFDC1Q9BY42 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC23.68■■□□□ 1.38
RTFDC1Q9BY42 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC23.68■■□□□ 1.38
RTFDC1Q9BY42 AC093458.2-201ENST00000623150 629 ntBASIC23.68■■□□□ 1.38
RTFDC1Q9BY42 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC23.68■■□□□ 1.38
RTFDC1Q9BY42 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.68■■□□□ 1.38
RTFDC1Q9BY42 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
RTFDC1Q9BY42 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms