Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
SMOQ99835 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
SMOQ99835 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMOQ99835 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.47■□□□□ 0.87
SMOQ99835 AFG3L1P-217ENST00000557444 2447 ntBASIC20.46■□□□□ 0.87
SMOQ99835 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMOQ99835 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMOQ99835 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.46■□□□□ 0.87
SMOQ99835 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMOQ99835 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SMOQ99835 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.46■□□□□ 0.87
SMOQ99835 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMOQ99835 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.46■□□□□ 0.87
SMOQ99835 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMOQ99835 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMOQ99835 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SMOQ99835 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.46■□□□□ 0.87
SMOQ99835 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.46■□□□□ 0.87
SMOQ99835 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.46■□□□□ 0.87
SMOQ99835 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMOQ99835 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.46■□□□□ 0.87
SMOQ99835 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SMOQ99835 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SMOQ99835 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.45■□□□□ 0.86
SMOQ99835 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMOQ99835 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMOQ99835 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMOQ99835 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.45■□□□□ 0.86
SMOQ99835 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.45■□□□□ 0.86
SMOQ99835 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMOQ99835 Z85996.1-201ENST00000494644 937 ntBASIC20.45■□□□□ 0.86
SMOQ99835 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.45■□□□□ 0.86
SMOQ99835 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.45■□□□□ 0.86
SMOQ99835 AC026271.3-201ENST00000571884 352 ntBASIC20.45■□□□□ 0.86
SMOQ99835 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.45■□□□□ 0.86
SMOQ99835 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMOQ99835 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SMOQ99835 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMOQ99835 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMOQ99835 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMOQ99835 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMOQ99835 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMOQ99835 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMOQ99835 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.45■□□□□ 0.86
SMOQ99835 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMOQ99835 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SMOQ99835 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.45■□□□□ 0.86
SMOQ99835 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMOQ99835 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SMOQ99835 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMOQ99835 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.44■□□□□ 0.86
SMOQ99835 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SMOQ99835 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.44■□□□□ 0.86
SMOQ99835 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMOQ99835 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMOQ99835 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SMOQ99835 RBM17P1-201ENST00000453646 1190 ntBASIC20.44■□□□□ 0.86
SMOQ99835 B3GAT3P1-201ENST00000471720 806 ntBASIC20.44■□□□□ 0.86
SMOQ99835 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.44■□□□□ 0.86
SMOQ99835 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMOQ99835 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMOQ99835 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.44■□□□□ 0.86
SMOQ99835 AL160286.2-201ENST00000567150 934 ntBASIC20.44■□□□□ 0.86
SMOQ99835 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.44■□□□□ 0.86
SMOQ99835 MIR6786-201ENST00000616843 113 ntBASIC20.44■□□□□ 0.86
SMOQ99835 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.44■□□□□ 0.86
SMOQ99835 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMOQ99835 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
SMOQ99835 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.44■□□□□ 0.86
SMOQ99835 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.44■□□□□ 0.86
SMOQ99835 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMOQ99835 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.43■□□□□ 0.86
SMOQ99835 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMOQ99835 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMOQ99835 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.43■□□□□ 0.86
SMOQ99835 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.43■□□□□ 0.86
SMOQ99835 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.43■□□□□ 0.86
SMOQ99835 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMOQ99835 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.43■□□□□ 0.86
SMOQ99835 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.43■□□□□ 0.86
SMOQ99835 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMOQ99835 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.43■□□□□ 0.86
SMOQ99835 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.43■□□□□ 0.86
SMOQ99835 AC008040.2-201ENST00000461049 708 ntBASIC20.43■□□□□ 0.86
SMOQ99835 BX088651.1-201ENST00000540551 451 ntBASIC20.43■□□□□ 0.86
SMOQ99835 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMOQ99835 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.43■□□□□ 0.86
SMOQ99835 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.43■□□□□ 0.86
SMOQ99835 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMOQ99835 AC079598.2-202ENST00000546624 1451 ntBASIC20.43■□□□□ 0.86
SMOQ99835 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMOQ99835 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMOQ99835 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMOQ99835 RCC2P6-201ENST00000526625 1557 ntBASIC20.42■□□□□ 0.86
SMOQ99835 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SMOQ99835 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.42■□□□□ 0.86
SMOQ99835 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.42■□□□□ 0.86
SMOQ99835 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
SMOQ99835 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.42■□□□□ 0.86
SMOQ99835 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms