Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE1Q99829 DUSP5P2-201ENST00000426873 1033 ntBASIC19.45■□□□□ 0.7
CPNE1Q99829 CROCCP5-201ENST00000436658 830 ntBASIC19.45■□□□□ 0.7
CPNE1Q99829 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.45■□□□□ 0.7
CPNE1Q99829 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.45■□□□□ 0.7
CPNE1Q99829 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.45■□□□□ 0.7
CPNE1Q99829 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE1Q99829 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CPNE1Q99829 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE1Q99829 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE1Q99829 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.45■□□□□ 0.7
CPNE1Q99829 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE1Q99829 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE1Q99829 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CPNE1Q99829 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE1Q99829 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE1Q99829 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CPNE1Q99829 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPNE1Q99829 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CPNE1Q99829 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE1Q99829 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.44■□□□□ 0.7
CPNE1Q99829 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE1Q99829 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE1Q99829 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE1Q99829 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE1Q99829 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.44■□□□□ 0.7
CPNE1Q99829 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.44■□□□□ 0.7
CPNE1Q99829 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CPNE1Q99829 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.44■□□□□ 0.7
CPNE1Q99829 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE1Q99829 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE1Q99829 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.44■□□□□ 0.7
CPNE1Q99829 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE1Q99829 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE1Q99829 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE1Q99829 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE1Q99829 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.44■□□□□ 0.7
CPNE1Q99829 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CPNE1Q99829 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.44■□□□□ 0.7
CPNE1Q99829 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE1Q99829 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE1Q99829 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CPNE1Q99829 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE1Q99829 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE1Q99829 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE1Q99829 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
CPNE1Q99829 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CPNE1Q99829 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE1Q99829 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE1Q99829 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.43■□□□□ 0.7
CPNE1Q99829 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CPNE1Q99829 AL121832.2-201ENST00000610979 668 ntBASIC19.43■□□□□ 0.7
CPNE1Q99829 AC092118.2-201ENST00000613495 667 ntBASIC19.43■□□□□ 0.7
CPNE1Q99829 AC006557.6-201ENST00000623071 864 ntBASIC19.43■□□□□ 0.7
CPNE1Q99829 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CPNE1Q99829 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE1Q99829 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE1Q99829 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE1Q99829 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE1Q99829 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE1Q99829 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.43■□□□□ 0.7
CPNE1Q99829 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CPNE1Q99829 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CPNE1Q99829 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE1Q99829 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CPNE1Q99829 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE1Q99829 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE1Q99829 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE1Q99829 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CPNE1Q99829 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CPNE1Q99829 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CPNE1Q99829 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE1Q99829 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE1Q99829 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE1Q99829 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE1Q99829 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CPNE1Q99829 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.42■□□□□ 0.7
CPNE1Q99829 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.42■□□□□ 0.7
CPNE1Q99829 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE1Q99829 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.42■□□□□ 0.7
CPNE1Q99829 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CPNE1Q99829 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.42■□□□□ 0.7
CPNE1Q99829 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE1Q99829 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE1Q99829 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE1Q99829 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.42■□□□□ 0.7
CPNE1Q99829 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CPNE1Q99829 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CPNE1Q99829 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
CPNE1Q99829 AIRN-201ENST00000601203 4374 ntBASIC19.41■□□□□ 0.7
CPNE1Q99829 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CPNE1Q99829 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CPNE1Q99829 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.41■□□□□ 0.7
CPNE1Q99829 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms