Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.6■□□□□ 0.57
CNTNAP3BQ96NU0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 SPDYE13P-201ENST00000445314 798 ntBASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 TSPY17P-201ENST00000450329 467 ntBASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 POLD2P1-201ENST00000511220 997 ntBASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 AL121772.3-201ENST00000610840 674 ntBASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CNTNAP3BQ96NU0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.58■□□□□ 0.57
CNTNAP3BQ96NU0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNTNAP3BQ96NU0 IL9RP2-201ENST00000423948 1312 ntBASIC18.58■□□□□ 0.57
CNTNAP3BQ96NU0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNTNAP3BQ96NU0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNTNAP3BQ96NU0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNTNAP3BQ96NU0 TSPY12P-201ENST00000421279 868 ntBASIC18.58■□□□□ 0.56
CNTNAP3BQ96NU0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.58■□□□□ 0.56
CNTNAP3BQ96NU0 AL353719.1-201ENST00000566847 864 ntBASIC18.58■□□□□ 0.56
CNTNAP3BQ96NU0 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.58■□□□□ 0.56
CNTNAP3BQ96NU0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
CNTNAP3BQ96NU0 AL023803.3-201ENST00000615559 522 ntBASIC18.58■□□□□ 0.56
CNTNAP3BQ96NU0 AC011298.2-201ENST00000617989 482 ntBASIC18.58■□□□□ 0.56
CNTNAP3BQ96NU0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.58■□□□□ 0.56
CNTNAP3BQ96NU0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 AC096733.2-201ENST00000609937 1394 ntBASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 STARP1-201ENST00000397973 869 ntBASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 AL645929.1-201ENST00000420084 975 ntBASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 AP002383.4-201ENST00000442518 975 ntBASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 YBX1P10-201ENST00000444752 975 ntBASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 BX276092.5-203ENST00000456199 560 ntBASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 SLC25A1P1-201ENST00000528351 927 ntBASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 AL121912.1-201ENST00000603683 238 ntBASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 AL390719.2-201ENST00000606993 987 ntBASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNTNAP3BQ96NU0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms