Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AP001412.1-201ENST00000608405 714 ntBASIC27.32■■□□□ 1.96
USP47Q96K76 CR392000.1-201ENST00000624770 1228 ntBASIC27.32■■□□□ 1.96
USP47Q96K76 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC27.32■■□□□ 1.96
USP47Q96K76 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
USP47Q96K76 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
USP47Q96K76 ANKRD18DP-204ENST00000455355 1975 ntBASIC27.32■■□□□ 1.96
USP47Q96K76 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
USP47Q96K76 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
USP47Q96K76 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP47Q96K76 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP47Q96K76 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP47Q96K76 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
USP47Q96K76 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
USP47Q96K76 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC27.31■■□□□ 1.96
USP47Q96K76 DHDH-203ENST00000522614 776 ntTSL 5 BASIC27.31■■□□□ 1.96
USP47Q96K76 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC27.31■■□□□ 1.96
USP47Q96K76 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC27.31■■□□□ 1.96
USP47Q96K76 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC27.31■■□□□ 1.96
USP47Q96K76 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP47Q96K76 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
USP47Q96K76 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC27.3■■□□□ 1.96
USP47Q96K76 MESTP1-201ENST00000404287 994 ntBASIC27.3■■□□□ 1.96
USP47Q96K76 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC27.3■■□□□ 1.96
USP47Q96K76 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC27.3■■□□□ 1.96
USP47Q96K76 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC27.3■■□□□ 1.96
USP47Q96K76 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC27.3■■□□□ 1.96
USP47Q96K76 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC27.3■■□□□ 1.96
USP47Q96K76 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC27.3■■□□□ 1.96
USP47Q96K76 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC27.3■■□□□ 1.96
USP47Q96K76 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC27.3■■□□□ 1.96
USP47Q96K76 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP47Q96K76 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP47Q96K76 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC27.3■■□□□ 1.96
USP47Q96K76 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
USP47Q96K76 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP47Q96K76 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP47Q96K76 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC27.29■■□□□ 1.96
USP47Q96K76 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP47Q96K76 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP47Q96K76 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP47Q96K76 TP73-202ENST00000354437 2140 ntTSL 5 BASIC27.29■■□□□ 1.96
USP47Q96K76 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
USP47Q96K76 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
USP47Q96K76 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC27.29■■□□□ 1.96
USP47Q96K76 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC27.29■■□□□ 1.96
USP47Q96K76 AC026471.5-201ENST00000615068 467 ntBASIC27.29■■□□□ 1.96
USP47Q96K76 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
USP47Q96K76 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC27.29■■□□□ 1.96
USP47Q96K76 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP47Q96K76 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC27.28■■□□□ 1.96
USP47Q96K76 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC27.28■■□□□ 1.96
USP47Q96K76 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC27.28■■□□□ 1.96
USP47Q96K76 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
USP47Q96K76 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP47Q96K76 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
USP47Q96K76 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC27.28■■□□□ 1.96
USP47Q96K76 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC27.27■■□□□ 1.96
USP47Q96K76 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
USP47Q96K76 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
USP47Q96K76 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
USP47Q96K76 PTPA-216ENST00000432651 857 ntTSL 2 BASIC27.27■■□□□ 1.96
USP47Q96K76 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
USP47Q96K76 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC27.27■■□□□ 1.96
USP47Q96K76 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
USP47Q96K76 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC27.27■■□□□ 1.96
USP47Q96K76 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC27.27■■□□□ 1.96
USP47Q96K76 SDHAP1-207ENST00000440850 2000 ntBASIC27.27■■□□□ 1.96
USP47Q96K76 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC27.26■■□□□ 1.96
USP47Q96K76 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
USP47Q96K76 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
USP47Q96K76 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC27.26■■□□□ 1.95
USP47Q96K76 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC27.26■■□□□ 1.95
USP47Q96K76 MIR4785-201ENST00000585005 73 ntBASIC27.26■■□□□ 1.95
USP47Q96K76 REXO1L10P-201ENST00000615707 1290 ntBASIC27.26■■□□□ 1.95
USP47Q96K76 REXO1L12P-201ENST00000622156 912 ntBASIC27.26■■□□□ 1.95
USP47Q96K76 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC27.26■■□□□ 1.95
USP47Q96K76 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC27.26■■□□□ 1.95
USP47Q96K76 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
USP47Q96K76 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC27.26■■□□□ 1.95
USP47Q96K76 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC27.26■■□□□ 1.95
USP47Q96K76 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC27.25■■□□□ 1.95
USP47Q96K76 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
USP47Q96K76 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC27.25■■□□□ 1.95
USP47Q96K76 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
USP47Q96K76 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC27.25■■□□□ 1.95
USP47Q96K76 AL160286.2-201ENST00000567150 934 ntBASIC27.25■■□□□ 1.95
USP47Q96K76 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
USP47Q96K76 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
USP47Q96K76 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
USP47Q96K76 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC27.25■■□□□ 1.95
USP47Q96K76 RCC2P6-201ENST00000526625 1557 ntBASIC27.25■■□□□ 1.95
USP47Q96K76 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
USP47Q96K76 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC27.25■■□□□ 1.95
USP47Q96K76 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC27.24■■□□□ 1.95
USP47Q96K76 SLC25A24-204ENST00000569674 2357 ntBASIC27.24■■□□□ 1.95
USP47Q96K76 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC27.24■■□□□ 1.95
USP47Q96K76 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
USP47Q96K76 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
USP47Q96K76 B3GAT3P1-201ENST00000471720 806 ntBASIC27.24■■□□□ 1.95
USP47Q96K76 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms