Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.34■□□□□ 0.53
SLC47A1Q96FL8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC47A1Q96FL8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SLC47A1Q96FL8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SLC47A1Q96FL8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SLC47A1Q96FL8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.33■□□□□ 0.53
SLC47A1Q96FL8 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.33■□□□□ 0.53
SLC47A1Q96FL8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.33■□□□□ 0.53
SLC47A1Q96FL8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 KRT18P68-201ENST00000392293 1000 ntBASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 CYP2T1P-201ENST00000432607 1285 ntBASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 AC022517.1-201ENST00000592429 346 ntBASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 AC026471.1-201ENST00000564629 3026 ntBASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SLC47A1Q96FL8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 AC007613.1-201ENST00000572811 2597 ntBASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SLC47A1Q96FL8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 AL161938.1-201ENST00000569833 2180 ntBASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 AC105020.6-201ENST00000621523 1217 ntBASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 OR10C1-204ENST00000622521 1039 ntBASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SLC47A1Q96FL8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 AC005082.1-201ENST00000413042 2259 ntBASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC47A1Q96FL8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms