Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC11Q96DB2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HDAC11Q96DB2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC11Q96DB2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
HDAC11Q96DB2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC11Q96DB2 KRT17P3-201ENST00000420566 1262 ntBASIC20.02■□□□□ 0.8
HDAC11Q96DB2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC11Q96DB2 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.02■□□□□ 0.8
HDAC11Q96DB2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
HDAC11Q96DB2 AC069544.1-201ENST00000609399 999 ntBASIC20.02■□□□□ 0.8
HDAC11Q96DB2 AC093484.2-201ENST00000580996 2166 ntBASIC20.02■□□□□ 0.8
HDAC11Q96DB2 AC116562.4-201ENST00000641316 2276 ntBASIC20.02■□□□□ 0.8
HDAC11Q96DB2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HDAC11Q96DB2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
HDAC11Q96DB2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.79
HDAC11Q96DB2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
HDAC11Q96DB2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 HCG11-201ENST00000411553 5696 ntBASIC20.01■□□□□ 0.79
HDAC11Q96DB2 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
HDAC11Q96DB2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20■□□□□ 0.79
HDAC11Q96DB2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20■□□□□ 0.79
HDAC11Q96DB2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC11Q96DB2 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HDAC11Q96DB2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC11Q96DB2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC11Q96DB2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
HDAC11Q96DB2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
HDAC11Q96DB2 ESRRAP1-201ENST00000400596 1257 ntBASIC20■□□□□ 0.79
HDAC11Q96DB2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20■□□□□ 0.79
HDAC11Q96DB2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20■□□□□ 0.79
HDAC11Q96DB2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20■□□□□ 0.79
HDAC11Q96DB2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20■□□□□ 0.79
HDAC11Q96DB2 KRT18P16-201ENST00000510337 1294 ntBASIC20■□□□□ 0.79
HDAC11Q96DB2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20■□□□□ 0.79
HDAC11Q96DB2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20■□□□□ 0.79
HDAC11Q96DB2 CD99P1-205ENST00000527459 561 ntBASIC20■□□□□ 0.79
HDAC11Q96DB2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20■□□□□ 0.79
HDAC11Q96DB2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20■□□□□ 0.79
HDAC11Q96DB2 PRKY-204ENST00000533551 1019 ntBASIC20■□□□□ 0.79
HDAC11Q96DB2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC11Q96DB2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20■□□□□ 0.79
HDAC11Q96DB2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20■□□□□ 0.79
HDAC11Q96DB2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
HDAC11Q96DB2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20■□□□□ 0.79
HDAC11Q96DB2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20■□□□□ 0.79
HDAC11Q96DB2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
HDAC11Q96DB2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
HDAC11Q96DB2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20■□□□□ 0.79
HDAC11Q96DB2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20■□□□□ 0.79
HDAC11Q96DB2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC11Q96DB2 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
HDAC11Q96DB2 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.99■□□□□ 0.79
HDAC11Q96DB2 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms