Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC093525.10-201ENST00000625130 1569 ntBASIC17.15■□□□□ 0.34
AP3S1Q92572 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
AP3S1Q92572 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
AP3S1Q92572 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3S1Q92572 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
AP3S1Q92572 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
AP3S1Q92572 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
AP3S1Q92572 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
AP3S1Q92572 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
AP3S1Q92572 AC138907.5-202ENST00000569484 235 ntBASIC17.15■□□□□ 0.34
AP3S1Q92572 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.15■□□□□ 0.34
AP3S1Q92572 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3S1Q92572 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
AP3S1Q92572 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
AP3S1Q92572 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.15■□□□□ 0.34
AP3S1Q92572 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
AP3S1Q92572 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3S1Q92572 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3S1Q92572 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3S1Q92572 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.14■□□□□ 0.33
AP3S1Q92572 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.14■□□□□ 0.33
AP3S1Q92572 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.14■□□□□ 0.33
AP3S1Q92572 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3S1Q92572 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
AP3S1Q92572 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
AP3S1Q92572 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.14■□□□□ 0.33
AP3S1Q92572 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3S1Q92572 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3S1Q92572 FZD10-202ENST00000539839 3282 ntBASIC17.14■□□□□ 0.33
AP3S1Q92572 AC141586.3-201ENST00000562166 1838 ntBASIC17.14■□□□□ 0.33
AP3S1Q92572 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3S1Q92572 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3S1Q92572 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
AP3S1Q92572 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3S1Q92572 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
AP3S1Q92572 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
AP3S1Q92572 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.13■□□□□ 0.33
AP3S1Q92572 KRT87P-202ENST00000534226 1464 ntBASIC17.13■□□□□ 0.33
AP3S1Q92572 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
AP3S1Q92572 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
AP3S1Q92572 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
AP3S1Q92572 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
AP3S1Q92572 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.13■□□□□ 0.33
AP3S1Q92572 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3S1Q92572 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
AP3S1Q92572 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3S1Q92572 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.13■□□□□ 0.33
AP3S1Q92572 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 AC068880.1-201ENST00000507289 2297 ntBASIC17.13■□□□□ 0.33
AP3S1Q92572 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
AP3S1Q92572 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3S1Q92572 KRT8P17-201ENST00000453110 1448 ntBASIC17.13■□□□□ 0.33
AP3S1Q92572 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms