Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19■□□□□ 0.63
ATL1Q8WXF7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATL1Q8WXF7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATL1Q8WXF7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATL1Q8WXF7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19■□□□□ 0.63
ATL1Q8WXF7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATL1Q8WXF7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
ATL1Q8WXF7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ATL1Q8WXF7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ATL1Q8WXF7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19■□□□□ 0.63
ATL1Q8WXF7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19■□□□□ 0.63
ATL1Q8WXF7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
ATL1Q8WXF7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ATL1Q8WXF7 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 TUBB8P6-201ENST00000436895 1288 ntBASIC18.98■□□□□ 0.63
ATL1Q8WXF7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 KRT18P16-201ENST00000510337 1294 ntBASIC18.98■□□□□ 0.63
ATL1Q8WXF7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ATL1Q8WXF7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 AC087289.5-201ENST00000586076 3175 ntBASIC18.97■□□□□ 0.63
ATL1Q8WXF7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 AC069544.1-201ENST00000609399 999 ntBASIC18.97■□□□□ 0.63
ATL1Q8WXF7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 KRT8P8-201ENST00000434750 1448 ntBASIC18.97■□□□□ 0.63
ATL1Q8WXF7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ATL1Q8WXF7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ATL1Q8WXF7 ESRRAP1-201ENST00000400596 1257 ntBASIC18.96■□□□□ 0.63
ATL1Q8WXF7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms