Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.7■□□□□ 0.74
PTCD2Q8WV60 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 AC124016.1-201ENST00000609552 612 ntBASIC19.69■□□□□ 0.74
PTCD2Q8WV60 FAM197Y4-202ENST00000622692 608 ntBASIC19.69■□□□□ 0.74
PTCD2Q8WV60 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTCD2Q8WV60 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTCD2Q8WV60 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.67■□□□□ 0.74
PTCD2Q8WV60 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTCD2Q8WV60 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTCD2Q8WV60 KRASP1-201ENST00000407852 552 ntBASIC19.66■□□□□ 0.74
PTCD2Q8WV60 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms