Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 B3GAT3P1-201ENST00000471720 806 ntBASIC19.74■□□□□ 0.75
CHD5Q8TDI0 AP003071.4-201ENST00000562276 1284 ntBASIC19.74■□□□□ 0.75
CHD5Q8TDI0 AL160286.2-201ENST00000567150 934 ntBASIC19.74■□□□□ 0.75
CHD5Q8TDI0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.74■□□□□ 0.75
CHD5Q8TDI0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 DGCR10-201ENST00000609839 495 ntBASIC19.74■□□□□ 0.75
CHD5Q8TDI0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.74■□□□□ 0.75
CHD5Q8TDI0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
CHD5Q8TDI0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 CR392000.1-201ENST00000624770 1228 ntBASIC19.72■□□□□ 0.75
CHD5Q8TDI0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 KRT8P9-201ENST00000558927 1449 ntBASIC19.72■□□□□ 0.75
CHD5Q8TDI0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CHD5Q8TDI0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 AL390955.1-201ENST00000428694 934 ntBASIC19.71■□□□□ 0.75
CHD5Q8TDI0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CHD5Q8TDI0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
CHD5Q8TDI0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms