Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
SMARCC2Q8TAQ2 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 UBE2SP1-201ENST00000450587 669 ntBASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 MAX-217ENST00000557277 728 ntTSL 3 BASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 AL121906.2-201ENST00000621597 723 ntBASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.8■■□□□ 1.24
SMARCC2Q8TAQ2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 AC098818.2-201ENST00000564925 2320 ntBASIC22.79■■□□□ 1.24
SMARCC2Q8TAQ2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 KRASP1-201ENST00000407852 552 ntBASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 AC093827.2-201ENST00000512654 315 ntBASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 AC124016.1-201ENST00000609552 612 ntBASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SMARCC2Q8TAQ2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMARCC2Q8TAQ2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMARCC2Q8TAQ2 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC22.77■■□□□ 1.24
SMARCC2Q8TAQ2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
SMARCC2Q8TAQ2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.77■■□□□ 1.24
SMARCC2Q8TAQ2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMARCC2Q8TAQ2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMARCC2Q8TAQ2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
SMARCC2Q8TAQ2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMARCC2Q8TAQ2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SMARCC2Q8TAQ2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC22.77■■□□□ 1.24
SMARCC2Q8TAQ2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC22.77■■□□□ 1.24
SMARCC2Q8TAQ2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.77■■□□□ 1.24
SMARCC2Q8TAQ2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.77■■□□□ 1.24
SMARCC2Q8TAQ2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
SMARCC2Q8TAQ2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
SMARCC2Q8TAQ2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
SMARCC2Q8TAQ2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.77■■□□□ 1.23
SMARCC2Q8TAQ2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.76■■□□□ 1.23
SMARCC2Q8TAQ2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms