Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNEP1R1Q8N9A8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 KRT8P8-201ENST00000434750 1448 ntBASIC17.29■□□□□ 0.36
CNEP1R1Q8N9A8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 AC026271.3-201ENST00000571884 352 ntBASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 AC079598.2-202ENST00000546624 1451 ntBASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 FSCN1P1-201ENST00000568912 1481 ntBASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNEP1R1Q8N9A8 HCG11-201ENST00000411553 5696 ntBASIC17.27■□□□□ 0.36
CNEP1R1Q8N9A8 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CNEP1R1Q8N9A8 AC099778.1-201ENST00000568593 1911 ntBASIC17.27■□□□□ 0.36
CNEP1R1Q8N9A8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNEP1R1Q8N9A8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNEP1R1Q8N9A8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNEP1R1Q8N9A8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNEP1R1Q8N9A8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CNEP1R1Q8N9A8 AC116562.2-201ENST00000507042 360 ntBASIC17.27■□□□□ 0.36
CNEP1R1Q8N9A8 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.27■□□□□ 0.36
CNEP1R1Q8N9A8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNEP1R1Q8N9A8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.27■□□□□ 0.36
CNEP1R1Q8N9A8 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.27■□□□□ 0.36
CNEP1R1Q8N9A8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CNEP1R1Q8N9A8 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNEP1R1Q8N9A8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
CNEP1R1Q8N9A8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNEP1R1Q8N9A8 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNEP1R1Q8N9A8 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CNEP1R1Q8N9A8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.27■□□□□ 0.35
CNEP1R1Q8N9A8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNEP1R1Q8N9A8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CNEP1R1Q8N9A8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 AL390955.1-201ENST00000428694 934 ntBASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 AC004980.1-204ENST00000429707 299 ntBASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 MIR6786-201ENST00000616843 113 ntBASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 HLA-A-209ENST00000638375 975 ntBASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.26■□□□□ 0.35
CNEP1R1Q8N9A8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNEP1R1Q8N9A8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CNEP1R1Q8N9A8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNEP1R1Q8N9A8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms