Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC33Q8N5R6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC33Q8N5R6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
CCDC33Q8N5R6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC33Q8N5R6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CCDC33Q8N5R6 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.42■□□□□ 0.86
CCDC33Q8N5R6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 AL121829.2-201ENST00000620908 328 ntBASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CCDC33Q8N5R6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 AC010331.1-201ENST00000611423 582 ntBASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CCDC33Q8N5R6 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC33Q8N5R6 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC33Q8N5R6 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.39■□□□□ 0.86
CCDC33Q8N5R6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC33Q8N5R6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CCDC33Q8N5R6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.39■□□□□ 0.86
CCDC33Q8N5R6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 HTR7P1-201ENST00000538670 1336 ntBASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC33Q8N5R6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC33Q8N5R6 NBPF21P-201ENST00000425093 1451 ntBASIC20.38■□□□□ 0.85
CCDC33Q8N5R6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC33Q8N5R6 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC33Q8N5R6 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.38■□□□□ 0.85
CCDC33Q8N5R6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC33Q8N5R6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC33Q8N5R6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC33Q8N5R6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC33Q8N5R6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms