Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AC012618.2-201ENST00000428058 849 ntBASIC20.72■□□□□ 0.91
TTC39CQ8N584 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.72■□□□□ 0.91
TTC39CQ8N584 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TTC39CQ8N584 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TTC39CQ8N584 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.72■□□□□ 0.91
TTC39CQ8N584 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.72■□□□□ 0.91
TTC39CQ8N584 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.72■□□□□ 0.91
TTC39CQ8N584 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TTC39CQ8N584 ZNF815P-204ENST00000434898 1737 ntBASIC20.72■□□□□ 0.91
TTC39CQ8N584 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC39CQ8N584 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TTC39CQ8N584 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39CQ8N584 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.71■□□□□ 0.91
TTC39CQ8N584 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TTC39CQ8N584 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39CQ8N584 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.71■□□□□ 0.91
TTC39CQ8N584 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39CQ8N584 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39CQ8N584 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.71■□□□□ 0.91
TTC39CQ8N584 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39CQ8N584 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39CQ8N584 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.71■□□□□ 0.91
TTC39CQ8N584 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.71■□□□□ 0.91
TTC39CQ8N584 AF186192.3-201ENST00000583427 947 ntBASIC20.71■□□□□ 0.91
TTC39CQ8N584 AC073195.1-201ENST00000607241 877 ntBASIC20.71■□□□□ 0.91
TTC39CQ8N584 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.71■□□□□ 0.91
TTC39CQ8N584 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39CQ8N584 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39CQ8N584 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.71■□□□□ 0.91
TTC39CQ8N584 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39CQ8N584 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39CQ8N584 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.71■□□□□ 0.91
TTC39CQ8N584 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
TTC39CQ8N584 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39CQ8N584 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39CQ8N584 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TTC39CQ8N584 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.71■□□□□ 0.91
TTC39CQ8N584 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.71■□□□□ 0.91
TTC39CQ8N584 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
TTC39CQ8N584 MIR718-201ENST00000390190 70 ntBASIC20.7■□□□□ 0.9
TTC39CQ8N584 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.7■□□□□ 0.9
TTC39CQ8N584 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC20.7■□□□□ 0.9
TTC39CQ8N584 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.7■□□□□ 0.9
TTC39CQ8N584 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39CQ8N584 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39CQ8N584 HLA-A-209ENST00000638375 975 ntBASIC20.7■□□□□ 0.9
TTC39CQ8N584 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39CQ8N584 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39CQ8N584 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.7■□□□□ 0.9
TTC39CQ8N584 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39CQ8N584 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39CQ8N584 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
TTC39CQ8N584 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39CQ8N584 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TTC39CQ8N584 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39CQ8N584 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39CQ8N584 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39CQ8N584 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39CQ8N584 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39CQ8N584 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39CQ8N584 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.69■□□□□ 0.9
TTC39CQ8N584 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39CQ8N584 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.69■□□□□ 0.9
TTC39CQ8N584 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TTC39CQ8N584 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.69■□□□□ 0.9
TTC39CQ8N584 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.69■□□□□ 0.9
TTC39CQ8N584 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39CQ8N584 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TTC39CQ8N584 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TTC39CQ8N584 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.69■□□□□ 0.9
TTC39CQ8N584 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TTC39CQ8N584 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.69■□□□□ 0.9
TTC39CQ8N584 AFG3L1P-217ENST00000557444 2447 ntBASIC20.68■□□□□ 0.9
TTC39CQ8N584 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TTC39CQ8N584 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.68■□□□□ 0.9
TTC39CQ8N584 RPS2P55-201ENST00000397318 883 ntBASIC20.68■□□□□ 0.9
TTC39CQ8N584 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TTC39CQ8N584 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TTC39CQ8N584 AC107956.1-201ENST00000494359 873 ntBASIC20.68■□□□□ 0.9
TTC39CQ8N584 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.68■□□□□ 0.9
TTC39CQ8N584 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.68■□□□□ 0.9
TTC39CQ8N584 AL160286.2-201ENST00000567150 934 ntBASIC20.68■□□□□ 0.9
TTC39CQ8N584 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.68■□□□□ 0.9
TTC39CQ8N584 AC233702.5-201ENST00000584107 538 ntBASIC20.68■□□□□ 0.9
TTC39CQ8N584 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.68■□□□□ 0.9
TTC39CQ8N584 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.68■□□□□ 0.9
TTC39CQ8N584 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.68■□□□□ 0.9
TTC39CQ8N584 AC131212.4-201ENST00000623606 975 ntBASIC20.68■□□□□ 0.9
TTC39CQ8N584 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.68■□□□□ 0.9
TTC39CQ8N584 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TTC39CQ8N584 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TTC39CQ8N584 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TTC39CQ8N584 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TTC39CQ8N584 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
TTC39CQ8N584 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.68■□□□□ 0.9
TTC39CQ8N584 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TTC39CQ8N584 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TTC39CQ8N584 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TTC39CQ8N584 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TTC39CQ8N584 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms