Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.32■□□□□ 0.68
NUDCD3Q8IVD9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 AC006333.2-201ENST00000607957 2099 ntBASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NUDCD3Q8IVD9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 AC026471.1-201ENST00000564629 3026 ntBASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NUDCD3Q8IVD9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 AC023632.3-201ENST00000521633 145 ntBASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 AC104581.1-202ENST00000635932 2618 ntBASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NUDCD3Q8IVD9 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 AC005082.1-201ENST00000413042 2259 ntBASIC19.28■□□□□ 0.68
NUDCD3Q8IVD9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms