Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.05■□□□□ 0.64
VRK3Q8IV63 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
VRK3Q8IV63 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.05■□□□□ 0.64
VRK3Q8IV63 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.05■□□□□ 0.64
VRK3Q8IV63 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
VRK3Q8IV63 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VRK3Q8IV63 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.05■□□□□ 0.64
VRK3Q8IV63 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VRK3Q8IV63 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VRK3Q8IV63 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
VRK3Q8IV63 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VRK3Q8IV63 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.05■□□□□ 0.64
VRK3Q8IV63 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.05■□□□□ 0.64
VRK3Q8IV63 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VRK3Q8IV63 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.05■□□□□ 0.64
VRK3Q8IV63 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.05■□□□□ 0.64
VRK3Q8IV63 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VRK3Q8IV63 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.05■□□□□ 0.64
VRK3Q8IV63 LINC01465-201ENST00000408887 1940 ntBASIC19.05■□□□□ 0.64
VRK3Q8IV63 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VRK3Q8IV63 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.05■□□□□ 0.64
VRK3Q8IV63 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.05■□□□□ 0.64
VRK3Q8IV63 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VRK3Q8IV63 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VRK3Q8IV63 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VRK3Q8IV63 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VRK3Q8IV63 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VRK3Q8IV63 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VRK3Q8IV63 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VRK3Q8IV63 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VRK3Q8IV63 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VRK3Q8IV63 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VRK3Q8IV63 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
VRK3Q8IV63 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK3Q8IV63 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.03■□□□□ 0.64
VRK3Q8IV63 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
VRK3Q8IV63 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK3Q8IV63 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
VRK3Q8IV63 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.03■□□□□ 0.64
VRK3Q8IV63 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.03■□□□□ 0.64
VRK3Q8IV63 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.03■□□□□ 0.64
VRK3Q8IV63 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VRK3Q8IV63 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.03■□□□□ 0.64
VRK3Q8IV63 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.03■□□□□ 0.64
VRK3Q8IV63 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK3Q8IV63 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK3Q8IV63 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
VRK3Q8IV63 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK3Q8IV63 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
VRK3Q8IV63 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK3Q8IV63 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VRK3Q8IV63 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK3Q8IV63 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
VRK3Q8IV63 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VRK3Q8IV63 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK3Q8IV63 ZNF815P-204ENST00000434898 1737 ntBASIC19.03■□□□□ 0.64
VRK3Q8IV63 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VRK3Q8IV63 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VRK3Q8IV63 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VRK3Q8IV63 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VRK3Q8IV63 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VRK3Q8IV63 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VRK3Q8IV63 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
VRK3Q8IV63 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VRK3Q8IV63 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
VRK3Q8IV63 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.02■□□□□ 0.64
VRK3Q8IV63 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.02■□□□□ 0.64
VRK3Q8IV63 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
VRK3Q8IV63 HLA-A-209ENST00000638375 975 ntBASIC19.02■□□□□ 0.64
VRK3Q8IV63 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VRK3Q8IV63 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.02■□□□□ 0.64
VRK3Q8IV63 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
VRK3Q8IV63 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
VRK3Q8IV63 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.02■□□□□ 0.63
VRK3Q8IV63 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.02■□□□□ 0.63
VRK3Q8IV63 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
VRK3Q8IV63 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
VRK3Q8IV63 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
VRK3Q8IV63 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
VRK3Q8IV63 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.01■□□□□ 0.63
VRK3Q8IV63 HTR7P1-201ENST00000538670 1336 ntBASIC19.01■□□□□ 0.63
VRK3Q8IV63 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
VRK3Q8IV63 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
VRK3Q8IV63 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms