Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 AP001271.2-201ENST00000624018 1556 ntBASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HMBOX1Q6NT76 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 AC243732.1-201ENST00000612648 864 ntBASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 AC011767.1-201ENST00000617410 1153 ntBASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 AC090164.3-201ENST00000610780 2143 ntBASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 WIZP1-201ENST00000531444 2299 ntBASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 AC138932.1-201ENST00000534164 6830 ntBASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
HMBOX1Q6NT76 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 AL356652.1-201ENST00000615962 565 ntBASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 RBM17P2-201ENST00000616397 1405 ntBASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 AC010536.3-201ENST00000620306 533 ntBASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
HMBOX1Q6NT76 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMBOX1Q6NT76 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
HMBOX1Q6NT76 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMBOX1Q6NT76 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
HMBOX1Q6NT76 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms