Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM35AQ53FP2 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM35AQ53FP2 KRT16P5-201ENST00000455284 522 ntBASIC18.52■□□□□ 0.56
TMEM35AQ53FP2 AC110285.5-201ENST00000611501 352 ntBASIC18.52■□□□□ 0.56
TMEM35AQ53FP2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.52■□□□□ 0.56
TMEM35AQ53FP2 ITM2C-210ENST00000620962 501 ntBASIC18.52■□□□□ 0.56
TMEM35AQ53FP2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM35AQ53FP2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM35AQ53FP2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.52■□□□□ 0.56
TMEM35AQ53FP2 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM35AQ53FP2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TMEM35AQ53FP2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TMEM35AQ53FP2 AC093484.2-201ENST00000580996 2166 ntBASIC18.52■□□□□ 0.56
TMEM35AQ53FP2 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TMEM35AQ53FP2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.52■□□□□ 0.55
TMEM35AQ53FP2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TMEM35AQ53FP2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TMEM35AQ53FP2 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TMEM35AQ53FP2 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 TSPY20P-201ENST00000450910 630 ntBASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TMEM35AQ53FP2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 KRT18P29-201ENST00000397031 1267 ntBASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 C1QL1P1-201ENST00000568105 661 ntBASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
TMEM35AQ53FP2 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 Z82202.1-201ENST00000623446 1880 ntBASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 AIRN-201ENST00000601203 4374 ntBASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TMEM35AQ53FP2 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
TMEM35AQ53FP2 AC116562.4-201ENST00000641316 2276 ntBASIC18.48■□□□□ 0.55
TMEM35AQ53FP2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms