Protein–RNA interactions for Protein: Q2M3C7

SPHKAP, A-kinase anchor protein SPHKAP, humanhuman

Predictions only

Length 1,700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHKAPQ2M3C7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
SPHKAPQ2M3C7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
SPHKAPQ2M3C7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
SPHKAPQ2M3C7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC28.07■■■□□ 2.08
SPHKAPQ2M3C7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
SPHKAPQ2M3C7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
SPHKAPQ2M3C7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 RNF152P1-201ENST00000397754 604 ntBASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 AL441883.1-201ENST00000566170 1045 ntBASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
SPHKAPQ2M3C7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SPHKAPQ2M3C7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC28.05■■■□□ 2.08
SPHKAPQ2M3C7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC28.05■■■□□ 2.08
SPHKAPQ2M3C7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
SPHKAPQ2M3C7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC28.05■■■□□ 2.08
SPHKAPQ2M3C7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SPHKAPQ2M3C7 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
SPHKAPQ2M3C7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
SPHKAPQ2M3C7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SPHKAPQ2M3C7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
SPHKAPQ2M3C7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
SPHKAPQ2M3C7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 COPE-203ENST00000351079 907 ntTSL 2 BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 BX664615.1-201ENST00000443558 458 ntBASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 NMU-205ENST00000511469 756 ntTSL 3 BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC28.04■■■□□ 2.08
SPHKAPQ2M3C7 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 UPK3BP1-201ENST00000428678 509 ntBASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 AC009947.2-201ENST00000444014 672 ntBASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC28.03■■■□□ 2.08
SPHKAPQ2M3C7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
SPHKAPQ2M3C7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC28.02■■■□□ 2.08
SPHKAPQ2M3C7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
SPHKAPQ2M3C7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
SPHKAPQ2M3C7 TCF3P1-201ENST00000423021 1937 ntBASIC28.02■■■□□ 2.08
SPHKAPQ2M3C7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC28.02■■■□□ 2.08
SPHKAPQ2M3C7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC28.02■■■□□ 2.08
SPHKAPQ2M3C7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC28.02■■■□□ 2.08
SPHKAPQ2M3C7 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC28.02■■■□□ 2.08
SPHKAPQ2M3C7 AC116407.4-201ENST00000623319 1061 ntBASIC28.02■■■□□ 2.08
SPHKAPQ2M3C7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC28.02■■■□□ 2.08
SPHKAPQ2M3C7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC28.02■■■□□ 2.08
SPHKAPQ2M3C7 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
SPHKAPQ2M3C7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SPHKAPQ2M3C7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SPHKAPQ2M3C7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC28.01■■■□□ 2.07
SPHKAPQ2M3C7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC28.01■■■□□ 2.07
SPHKAPQ2M3C7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC28.01■■■□□ 2.07
SPHKAPQ2M3C7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC28.01■■■□□ 2.07
SPHKAPQ2M3C7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SPHKAPQ2M3C7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
SPHKAPQ2M3C7 AC099778.1-201ENST00000568593 1911 ntBASIC28.01■■■□□ 2.07
SPHKAPQ2M3C7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
SPHKAPQ2M3C7 KRT18P38-201ENST00000449496 1282 ntBASIC28.01■■■□□ 2.07
SPHKAPQ2M3C7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
SPHKAPQ2M3C7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms