Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP46P62068 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP46P62068 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
USP46P62068 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
USP46P62068 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.49■□□□□ 0.87
USP46P62068 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
USP46P62068 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.48■□□□□ 0.87
USP46P62068 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP46P62068 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP46P62068 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP46P62068 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
USP46P62068 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP46P62068 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP46P62068 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP46P62068 KRT8P9-201ENST00000558927 1449 ntBASIC20.48■□□□□ 0.87
USP46P62068 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
USP46P62068 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP46P62068 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP46P62068 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.48■□□□□ 0.87
USP46P62068 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.48■□□□□ 0.87
USP46P62068 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.48■□□□□ 0.87
USP46P62068 AL031985.4-201ENST00000642138 673 ntBASIC20.48■□□□□ 0.87
USP46P62068 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP46P62068 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP46P62068 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP46P62068 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP46P62068 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.48■□□□□ 0.87
USP46P62068 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP46P62068 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP46P62068 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP46P62068 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP46P62068 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
USP46P62068 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.47■□□□□ 0.87
USP46P62068 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.47■□□□□ 0.87
USP46P62068 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP46P62068 KRT8P8-201ENST00000434750 1448 ntBASIC20.47■□□□□ 0.87
USP46P62068 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP46P62068 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP46P62068 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP46P62068 AC011506.1-201ENST00000474329 610 ntBASIC20.47■□□□□ 0.87
USP46P62068 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
USP46P62068 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.47■□□□□ 0.87
USP46P62068 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.47■□□□□ 0.87
USP46P62068 AC133561.5-201ENST00000635547 218 ntBASIC20.47■□□□□ 0.87
USP46P62068 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.47■□□□□ 0.87
USP46P62068 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
USP46P62068 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.47■□□□□ 0.87
USP46P62068 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
USP46P62068 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
USP46P62068 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP46P62068 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
USP46P62068 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
USP46P62068 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP46P62068 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.46■□□□□ 0.87
USP46P62068 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.46■□□□□ 0.87
USP46P62068 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP46P62068 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP46P62068 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
USP46P62068 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP46P62068 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP46P62068 AL390955.1-201ENST00000428694 934 ntBASIC20.46■□□□□ 0.87
USP46P62068 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
USP46P62068 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
USP46P62068 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP46P62068 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP46P62068 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP46P62068 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP46P62068 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
USP46P62068 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP46P62068 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP46P62068 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP46P62068 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP46P62068 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
USP46P62068 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.45■□□□□ 0.86
USP46P62068 MMP23A-201ENST00000234610 1017 ntBASIC20.45■□□□□ 0.86
USP46P62068 UNC93B2-201ENST00000285383 730 ntBASIC20.45■□□□□ 0.86
USP46P62068 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
USP46P62068 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP46P62068 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP46P62068 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.45■□□□□ 0.86
USP46P62068 B3GAT3P1-201ENST00000471720 806 ntBASIC20.45■□□□□ 0.86
USP46P62068 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.45■□□□□ 0.86
USP46P62068 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.45■□□□□ 0.86
USP46P62068 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.45■□□□□ 0.86
USP46P62068 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.45■□□□□ 0.86
USP46P62068 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP46P62068 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.45■□□□□ 0.86
USP46P62068 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
USP46P62068 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.45■□□□□ 0.86
USP46P62068 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.45■□□□□ 0.86
USP46P62068 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.45■□□□□ 0.86
USP46P62068 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP46P62068 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP46P62068 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP46P62068 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.44■□□□□ 0.86
USP46P62068 MIR1238-201ENST00000408483 83 ntBASIC20.44■□□□□ 0.86
USP46P62068 AC026271.3-201ENST00000571884 352 ntBASIC20.44■□□□□ 0.86
USP46P62068 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.44■□□□□ 0.86
USP46P62068 AC012306.2-201ENST00000609350 630 ntBASIC20.44■□□□□ 0.86
USP46P62068 MIR6786-201ENST00000616843 113 ntBASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms