Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDC42P60953 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDC42P60953 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDC42P60953 AC004854.2-201ENST00000608450 1441 ntBASIC17.8■□□□□ 0.44
CDC42P60953 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.8■□□□□ 0.44
CDC42P60953 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CDC42P60953 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CDC42P60953 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.79■□□□□ 0.44
CDC42P60953 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CDC42P60953 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CDC42P60953 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDC42P60953 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDC42P60953 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CDC42P60953 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CDC42P60953 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
CDC42P60953 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CDC42P60953 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDC42P60953 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.79■□□□□ 0.44
CDC42P60953 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDC42P60953 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDC42P60953 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDC42P60953 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDC42P60953 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CDC42P60953 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDC42P60953 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CDC42P60953 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CDC42P60953 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 KRT19P1-201ENST00000405746 1186 ntBASIC17.78■□□□□ 0.44
CDC42P60953 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.78■□□□□ 0.44
CDC42P60953 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.78■□□□□ 0.44
CDC42P60953 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.78■□□□□ 0.44
CDC42P60953 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.78■□□□□ 0.44
CDC42P60953 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 AL049812.1-201ENST00000432563 2267 ntBASIC17.78■□□□□ 0.44
CDC42P60953 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 AC006333.2-201ENST00000607957 2099 ntBASIC17.78■□□□□ 0.44
CDC42P60953 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CDC42P60953 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDC42P60953 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC42P60953 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDC42P60953 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC42P60953 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC42P60953 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC42P60953 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDC42P60953 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.77■□□□□ 0.44
CDC42P60953 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC42P60953 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC42P60953 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC42P60953 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.77■□□□□ 0.44
CDC42P60953 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
CDC42P60953 AL162412.1-201ENST00000567129 965 ntBASIC17.77■□□□□ 0.44
CDC42P60953 UBE2DNL-204ENST00000602536 740 ntBASIC17.77■□□□□ 0.44
CDC42P60953 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC42P60953 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDC42P60953 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CDC42P60953 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CDC42P60953 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CDC42P60953 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.77■□□□□ 0.43
CDC42P60953 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDC42P60953 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDC42P60953 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDC42P60953 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDC42P60953 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CDC42P60953 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CDC42P60953 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CDC42P60953 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDC42P60953 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CDC42P60953 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.76■□□□□ 0.43
CDC42P60953 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CDC42P60953 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CDC42P60953 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.76■□□□□ 0.43
CDC42P60953 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CDC42P60953 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.76■□□□□ 0.43
CDC42P60953 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms