Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
EIF3EP60228 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
EIF3EP60228 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
EIF3EP60228 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.08■□□□□ 0.8
EIF3EP60228 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
EIF3EP60228 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
EIF3EP60228 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
EIF3EP60228 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
EIF3EP60228 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3EP60228 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3EP60228 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3EP60228 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3EP60228 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3EP60228 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
EIF3EP60228 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3EP60228 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.07■□□□□ 0.8
EIF3EP60228 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.07■□□□□ 0.8
EIF3EP60228 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
EIF3EP60228 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3EP60228 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.07■□□□□ 0.8
EIF3EP60228 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
EIF3EP60228 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3EP60228 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.07■□□□□ 0.8
EIF3EP60228 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3EP60228 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3EP60228 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3EP60228 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
EIF3EP60228 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3EP60228 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
EIF3EP60228 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
EIF3EP60228 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3EP60228 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.06■□□□□ 0.8
EIF3EP60228 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3EP60228 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
EIF3EP60228 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
EIF3EP60228 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.06■□□□□ 0.8
EIF3EP60228 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3EP60228 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
EIF3EP60228 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.06■□□□□ 0.8
EIF3EP60228 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.06■□□□□ 0.8
EIF3EP60228 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.06■□□□□ 0.8
EIF3EP60228 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.06■□□□□ 0.8
EIF3EP60228 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.06■□□□□ 0.8
EIF3EP60228 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.06■□□□□ 0.8
EIF3EP60228 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.06■□□□□ 0.8
EIF3EP60228 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.06■□□□□ 0.8
EIF3EP60228 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3EP60228 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.06■□□□□ 0.8
EIF3EP60228 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3EP60228 AP006587.1-201ENST00000534129 1502 ntBASIC20.06■□□□□ 0.8
EIF3EP60228 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
EIF3EP60228 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3EP60228 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
EIF3EP60228 AL020996.1-203ENST00000536896 2307 ntBASIC20.05■□□□□ 0.8
EIF3EP60228 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
EIF3EP60228 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.05■□□□□ 0.8
EIF3EP60228 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3EP60228 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3EP60228 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
EIF3EP60228 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3EP60228 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3EP60228 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3EP60228 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3EP60228 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.05■□□□□ 0.8
EIF3EP60228 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
EIF3EP60228 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3EP60228 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
EIF3EP60228 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.05■□□□□ 0.8
EIF3EP60228 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.05■□□□□ 0.8
EIF3EP60228 AC120498.8-201ENST00000614275 531 ntBASIC20.05■□□□□ 0.8
EIF3EP60228 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3EP60228 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.05■□□□□ 0.8
EIF3EP60228 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3EP60228 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
EIF3EP60228 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.05■□□□□ 0.8
EIF3EP60228 ZNF815P-204ENST00000434898 1737 ntBASIC20.05■□□□□ 0.8
EIF3EP60228 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
EIF3EP60228 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
EIF3EP60228 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
EIF3EP60228 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3EP60228 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3EP60228 LINC01465-201ENST00000408887 1940 ntBASIC20.04■□□□□ 0.8
EIF3EP60228 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3EP60228 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
EIF3EP60228 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3EP60228 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
EIF3EP60228 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3EP60228 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.04■□□□□ 0.8
EIF3EP60228 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.04■□□□□ 0.8
EIF3EP60228 AC069152.1-201ENST00000438030 544 ntBASIC20.04■□□□□ 0.8
EIF3EP60228 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.04■□□□□ 0.8
EIF3EP60228 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.04■□□□□ 0.8
EIF3EP60228 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.04■□□□□ 0.8
EIF3EP60228 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
EIF3EP60228 AC133041.1-202ENST00000642053 222 ntBASIC20.04■□□□□ 0.8
EIF3EP60228 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
EIF3EP60228 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3EP60228 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3EP60228 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
EIF3EP60228 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms