Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB38P57729 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB38P57729 NIFKP9-201ENST00000419265 221 ntBASIC18.33■□□□□ 0.52
RAB38P57729 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.33■□□□□ 0.52
RAB38P57729 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB38P57729 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.33■□□□□ 0.52
RAB38P57729 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB38P57729 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB38P57729 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.33■□□□□ 0.52
RAB38P57729 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.33■□□□□ 0.52
RAB38P57729 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB38P57729 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB38P57729 HLA-A-209ENST00000638375 975 ntBASIC18.33■□□□□ 0.52
RAB38P57729 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB38P57729 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.33■□□□□ 0.52
RAB38P57729 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB38P57729 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB38P57729 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB38P57729 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB38P57729 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAB38P57729 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB38P57729 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB38P57729 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB38P57729 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
RAB38P57729 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RAB38P57729 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RAB38P57729 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB38P57729 AC012618.2-201ENST00000428058 849 ntBASIC18.32■□□□□ 0.52
RAB38P57729 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB38P57729 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.32■□□□□ 0.52
RAB38P57729 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.32■□□□□ 0.52
RAB38P57729 AF186192.3-201ENST00000583427 947 ntBASIC18.32■□□□□ 0.52
RAB38P57729 AL158211.5-201ENST00000623583 2518 ntBASIC18.32■□□□□ 0.52
RAB38P57729 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB38P57729 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB38P57729 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.32■□□□□ 0.52
RAB38P57729 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB38P57729 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB38P57729 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB38P57729 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
RAB38P57729 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.31■□□□□ 0.52
RAB38P57729 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB38P57729 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RAB38P57729 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.31■□□□□ 0.52
RAB38P57729 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB38P57729 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB38P57729 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB38P57729 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB38P57729 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB38P57729 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB38P57729 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB38P57729 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.31■□□□□ 0.52
RAB38P57729 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB38P57729 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB38P57729 RPS2P55-201ENST00000397318 883 ntBASIC18.31■□□□□ 0.52
RAB38P57729 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.31■□□□□ 0.52
RAB38P57729 AC107956.1-201ENST00000494359 873 ntBASIC18.31■□□□□ 0.52
RAB38P57729 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.31■□□□□ 0.52
RAB38P57729 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.31■□□□□ 0.52
RAB38P57729 AC008550.1-201ENST00000511500 884 ntBASIC18.31■□□□□ 0.52
RAB38P57729 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.31■□□□□ 0.52
RAB38P57729 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.31■□□□□ 0.52
RAB38P57729 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.31■□□□□ 0.52
RAB38P57729 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.31■□□□□ 0.52
RAB38P57729 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB38P57729 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB38P57729 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB38P57729 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.31■□□□□ 0.52
RAB38P57729 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB38P57729 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB38P57729 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB38P57729 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB38P57729 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB38P57729 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB38P57729 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAB38P57729 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB38P57729 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAB38P57729 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RAB38P57729 ZNF815P-204ENST00000434898 1737 ntBASIC18.3■□□□□ 0.52
RAB38P57729 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAB38P57729 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RAB38P57729 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB38P57729 MIR718-201ENST00000390190 70 ntBASIC18.3■□□□□ 0.52
RAB38P57729 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB38P57729 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAB38P57729 KSR1P1-201ENST00000446298 240 ntBASIC18.3■□□□□ 0.52
RAB38P57729 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RAB38P57729 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.3■□□□□ 0.52
RAB38P57729 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB38P57729 AC073195.1-201ENST00000607241 877 ntBASIC18.3■□□□□ 0.52
RAB38P57729 AL445675.2-201ENST00000620291 557 ntBASIC18.3■□□□□ 0.52
RAB38P57729 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB38P57729 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB38P57729 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB38P57729 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB38P57729 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.29■□□□□ 0.52
RAB38P57729 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RAB38P57729 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB38P57729 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB38P57729 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms