Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CLDN12P56749 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN12P56749 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN12P56749 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLDN12P56749 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN12P56749 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
CLDN12P56749 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLDN12P56749 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN12P56749 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLDN12P56749 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CLDN12P56749 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN12P56749 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN12P56749 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
CLDN12P56749 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CLDN12P56749 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.91■□□□□ 0.3
CLDN12P56749 KRT19P1-201ENST00000405746 1186 ntBASIC16.91■□□□□ 0.3
CLDN12P56749 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 TERF1P5-201ENST00000477545 1207 ntBASIC16.91■□□□□ 0.3
CLDN12P56749 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CLDN12P56749 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN12P56749 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN12P56749 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN12P56749 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLDN12P56749 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN12P56749 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN12P56749 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN12P56749 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN12P56749 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.9■□□□□ 0.3
CLDN12P56749 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CLDN12P56749 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
CLDN12P56749 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CLDN12P56749 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN12P56749 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.9■□□□□ 0.3
CLDN12P56749 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN12P56749 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.9■□□□□ 0.3
CLDN12P56749 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.9■□□□□ 0.3
CLDN12P56749 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CLDN12P56749 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CLDN12P56749 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.3
CLDN12P56749 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CLDN12P56749 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN12P56749 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.89■□□□□ 0.29
CLDN12P56749 TEX21P-204ENST00000641479 1693 ntBASIC16.89■□□□□ 0.29
CLDN12P56749 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN12P56749 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN12P56749 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN12P56749 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.89■□□□□ 0.29
CLDN12P56749 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.89■□□□□ 0.29
CLDN12P56749 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.89■□□□□ 0.29
CLDN12P56749 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN12P56749 AC010536.3-201ENST00000620306 533 ntBASIC16.89■□□□□ 0.29
CLDN12P56749 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN12P56749 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN12P56749 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN12P56749 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CLDN12P56749 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN12P56749 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN12P56749 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CLDN12P56749 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN12P56749 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CLDN12P56749 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms