Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN6P56747 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
CLDN6P56747 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN6P56747 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN6P56747 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CLDN6P56747 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN6P56747 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CLDN6P56747 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN6P56747 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN6P56747 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CLDN6P56747 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN6P56747 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.72■□□□□ 0.59
CLDN6P56747 AL441883.1-201ENST00000566170 1045 ntBASIC18.72■□□□□ 0.59
CLDN6P56747 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN6P56747 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.72■□□□□ 0.59
CLDN6P56747 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN6P56747 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN6P56747 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN6P56747 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN6P56747 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN6P56747 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN6P56747 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLDN6P56747 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN6P56747 LINC01465-201ENST00000408887 1940 ntBASIC18.72■□□□□ 0.59
CLDN6P56747 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN6P56747 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN6P56747 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN6P56747 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
CLDN6P56747 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDN6P56747 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN6P56747 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN6P56747 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN6P56747 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN6P56747 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN6P56747 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.71■□□□□ 0.59
CLDN6P56747 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CLDN6P56747 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN6P56747 KRT18P38-201ENST00000449496 1282 ntBASIC18.71■□□□□ 0.59
CLDN6P56747 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.71■□□□□ 0.59
CLDN6P56747 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
CLDN6P56747 AC012313.10-201ENST00000623509 926 ntBASIC18.71■□□□□ 0.59
CLDN6P56747 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.71■□□□□ 0.59
CLDN6P56747 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN6P56747 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.7■□□□□ 0.58
CLDN6P56747 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN6P56747 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN6P56747 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN6P56747 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN6P56747 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN6P56747 AC026396.1-201ENST00000419388 421 ntBASIC18.7■□□□□ 0.58
CLDN6P56747 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN6P56747 Z85996.1-201ENST00000494644 937 ntBASIC18.7■□□□□ 0.58
CLDN6P56747 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN6P56747 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN6P56747 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.7■□□□□ 0.58
CLDN6P56747 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CLDN6P56747 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN6P56747 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CLDN6P56747 PHGDH-210ENST00000641115 1638 ntBASIC18.7■□□□□ 0.58
CLDN6P56747 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.7■□□□□ 0.58
CLDN6P56747 SMG8-203ENST00000578922 2178 ntBASIC18.69■□□□□ 0.58
CLDN6P56747 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN6P56747 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN6P56747 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CLDN6P56747 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN6P56747 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN6P56747 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.69■□□□□ 0.58
CLDN6P56747 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN6P56747 SLC25A1P2-201ENST00000430693 912 ntBASIC18.69■□□□□ 0.58
CLDN6P56747 HCG4P8-203ENST00000443049 980 ntBASIC18.69■□□□□ 0.58
CLDN6P56747 AL671277.2-201ENST00000458060 996 ntBASIC18.69■□□□□ 0.58
CLDN6P56747 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN6P56747 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN6P56747 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.69■□□□□ 0.58
CLDN6P56747 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN6P56747 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN6P56747 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN6P56747 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.69■□□□□ 0.58
CLDN6P56747 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.69■□□□□ 0.58
CLDN6P56747 AL121956.5-201ENST00000625261 221 ntBASIC18.69■□□□□ 0.58
CLDN6P56747 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.69■□□□□ 0.58
CLDN6P56747 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.69■□□□□ 0.58
CLDN6P56747 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN6P56747 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN6P56747 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN6P56747 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CLDN6P56747 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CLDN6P56747 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CLDN6P56747 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
CLDN6P56747 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN6P56747 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN6P56747 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN6P56747 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN6P56747 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.68■□□□□ 0.58
CLDN6P56747 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CLDN6P56747 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.68■□□□□ 0.58
CLDN6P56747 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.68■□□□□ 0.58
CLDN6P56747 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.68■□□□□ 0.58
CLDN6P56747 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.68■□□□□ 0.58
CLDN6P56747 CLEC4GP1-201ENST00000596555 870 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms