Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H2P55055 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.39■□□□□ 0.53
NR1H2P55055 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NR1H2P55055 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.39■□□□□ 0.53
NR1H2P55055 SLC29A4P1-201ENST00000398760 971 ntBASIC18.39■□□□□ 0.53
NR1H2P55055 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H2P55055 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.39■□□□□ 0.53
NR1H2P55055 AC083906.2-201ENST00000511578 360 ntBASIC18.39■□□□□ 0.53
NR1H2P55055 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.39■□□□□ 0.53
NR1H2P55055 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H2P55055 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H2P55055 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H2P55055 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H2P55055 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H2P55055 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H2P55055 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.39■□□□□ 0.53
NR1H2P55055 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.39■□□□□ 0.53
NR1H2P55055 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NR1H2P55055 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H2P55055 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H2P55055 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H2P55055 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.39■□□□□ 0.53
NR1H2P55055 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NR1H2P55055 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NR1H2P55055 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H2P55055 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H2P55055 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NR1H2P55055 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H2P55055 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H2P55055 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NR1H2P55055 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NR1H2P55055 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H2P55055 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H2P55055 ABHD17AP1-201ENST00000358206 933 ntBASIC18.38■□□□□ 0.53
NR1H2P55055 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.38■□□□□ 0.53
NR1H2P55055 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.38■□□□□ 0.53
NR1H2P55055 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.38■□□□□ 0.53
NR1H2P55055 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.38■□□□□ 0.53
NR1H2P55055 AC008175.2-201ENST00000612840 297 ntBASIC18.38■□□□□ 0.53
NR1H2P55055 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NR1H2P55055 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NR1H2P55055 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.38■□□□□ 0.53
NR1H2P55055 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H2P55055 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H2P55055 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H2P55055 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
NR1H2P55055 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NR1H2P55055 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.38■□□□□ 0.53
NR1H2P55055 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.38■□□□□ 0.53
NR1H2P55055 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H2P55055 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.38■□□□□ 0.53
NR1H2P55055 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H2P55055 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H2P55055 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H2P55055 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NR1H2P55055 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.38■□□□□ 0.53
NR1H2P55055 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H2P55055 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.37■□□□□ 0.53
NR1H2P55055 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.37■□□□□ 0.53
NR1H2P55055 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.37■□□□□ 0.53
NR1H2P55055 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H2P55055 TSPY6P-201ENST00000448518 926 ntBASIC18.37■□□□□ 0.53
NR1H2P55055 AC142086.2-201ENST00000569753 217 ntBASIC18.37■□□□□ 0.53
NR1H2P55055 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H2P55055 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H2P55055 AL050303.2-201ENST00000619798 666 ntBASIC18.37■□□□□ 0.53
NR1H2P55055 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.37■□□□□ 0.53
NR1H2P55055 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NR1H2P55055 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.37■□□□□ 0.53
NR1H2P55055 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.37■□□□□ 0.53
NR1H2P55055 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.37■□□□□ 0.53
NR1H2P55055 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H2P55055 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.37■□□□□ 0.53
NR1H2P55055 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.37■□□□□ 0.53
NR1H2P55055 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H2P55055 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H2P55055 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NR1H2P55055 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NR1H2P55055 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NR1H2P55055 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.37■□□□□ 0.53
NR1H2P55055 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NR1H2P55055 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H2P55055 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H2P55055 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NR1H2P55055 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H2P55055 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NR1H2P55055 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NR1H2P55055 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H2P55055 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.36■□□□□ 0.53
NR1H2P55055 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.36■□□□□ 0.53
NR1H2P55055 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.36■□□□□ 0.53
NR1H2P55055 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.36■□□□□ 0.53
NR1H2P55055 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H2P55055 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NR1H2P55055 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H2P55055 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NR1H2P55055 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.36■□□□□ 0.53
NR1H2P55055 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.36■□□□□ 0.53
NR1H2P55055 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.36■□□□□ 0.53
NR1H2P55055 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms