Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUBP1P53384 DRAXINP1-201ENST00000437611 948 ntBASIC19.4■□□□□ 0.7
NUBP1P53384 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUBP1P53384 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.4■□□□□ 0.7
NUBP1P53384 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.4■□□□□ 0.7
NUBP1P53384 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.4■□□□□ 0.7
NUBP1P53384 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.4■□□□□ 0.7
NUBP1P53384 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUBP1P53384 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.4■□□□□ 0.7
NUBP1P53384 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.4■□□□□ 0.7
NUBP1P53384 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUBP1P53384 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUBP1P53384 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
NUBP1P53384 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUBP1P53384 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NUBP1P53384 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
NUBP1P53384 MIR574-201ENST00000385209 96 ntBASIC19.39■□□□□ 0.69
NUBP1P53384 MIR1233-2-201ENST00000408138 82 ntBASIC19.39■□□□□ 0.69
NUBP1P53384 MIR1233-1-201ENST00000408722 82 ntBASIC19.39■□□□□ 0.69
NUBP1P53384 AL590627.1-203ENST00000421194 1026 ntBASIC19.39■□□□□ 0.69
NUBP1P53384 EIF2S2P5-201ENST00000457635 968 ntBASIC19.39■□□□□ 0.69
NUBP1P53384 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.39■□□□□ 0.69
NUBP1P53384 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
NUBP1P53384 AC012615.1-201ENST00000565797 1299 ntBASIC19.39■□□□□ 0.69
NUBP1P53384 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.39■□□□□ 0.69
NUBP1P53384 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.39■□□□□ 0.69
NUBP1P53384 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.39■□□□□ 0.69
NUBP1P53384 HLA-A-201ENST00000376802 1334 ntBASIC19.39■□□□□ 0.69
NUBP1P53384 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.39■□□□□ 0.69
NUBP1P53384 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUBP1P53384 AC093525.10-201ENST00000625130 1569 ntBASIC19.39■□□□□ 0.69
NUBP1P53384 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.39■□□□□ 0.69
NUBP1P53384 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NUBP1P53384 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NUBP1P53384 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUBP1P53384 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUBP1P53384 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUBP1P53384 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.38■□□□□ 0.69
NUBP1P53384 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NUBP1P53384 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NUBP1P53384 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NUBP1P53384 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUBP1P53384 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUBP1P53384 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUBP1P53384 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.38■□□□□ 0.69
NUBP1P53384 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.38■□□□□ 0.69
NUBP1P53384 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.38■□□□□ 0.69
NUBP1P53384 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.38■□□□□ 0.69
NUBP1P53384 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.38■□□□□ 0.69
NUBP1P53384 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.38■□□□□ 0.69
NUBP1P53384 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.38■□□□□ 0.69
NUBP1P53384 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUBP1P53384 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUBP1P53384 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUBP1P53384 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.37■□□□□ 0.69
NUBP1P53384 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUBP1P53384 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.37■□□□□ 0.69
NUBP1P53384 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.37■□□□□ 0.69
NUBP1P53384 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NUBP1P53384 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUBP1P53384 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NUBP1P53384 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUBP1P53384 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NUBP1P53384 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
NUBP1P53384 KRT8P8-201ENST00000434750 1448 ntBASIC19.37■□□□□ 0.69
NUBP1P53384 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NUBP1P53384 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUBP1P53384 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUBP1P53384 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.37■□□□□ 0.69
NUBP1P53384 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC19.37■□□□□ 0.69
NUBP1P53384 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.37■□□□□ 0.69
NUBP1P53384 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC19.37■□□□□ 0.69
NUBP1P53384 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.37■□□□□ 0.69
NUBP1P53384 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUBP1P53384 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUBP1P53384 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NUBP1P53384 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUBP1P53384 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.36■□□□□ 0.69
NUBP1P53384 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NUBP1P53384 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.36■□□□□ 0.69
NUBP1P53384 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.36■□□□□ 0.69
NUBP1P53384 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUBP1P53384 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.36■□□□□ 0.69
NUBP1P53384 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.36■□□□□ 0.69
NUBP1P53384 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC19.36■□□□□ 0.69
NUBP1P53384 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.36■□□□□ 0.69
NUBP1P53384 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.36■□□□□ 0.69
NUBP1P53384 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.36■□□□□ 0.69
NUBP1P53384 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.36■□□□□ 0.69
NUBP1P53384 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.36■□□□□ 0.69
NUBP1P53384 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUBP1P53384 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NUBP1P53384 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.36■□□□□ 0.69
NUBP1P53384 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.36■□□□□ 0.69
NUBP1P53384 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NUBP1P53384 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NUBP1P53384 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NUBP1P53384 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUBP1P53384 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NUBP1P53384 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms