Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CXCL5P42830 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CXCL5P42830 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCL5P42830 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
CXCL5P42830 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCL5P42830 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCL5P42830 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.11□□□□□ -0.31
CXCL5P42830 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCL5P42830 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCL5P42830 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CXCL5P42830 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCL5P42830 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCL5P42830 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
CXCL5P42830 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.11□□□□□ -0.31
CXCL5P42830 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC13.11□□□□□ -0.31
CXCL5P42830 PTGES2-AS1-201ENST00000443493 2100 ntBASIC13.11□□□□□ -0.31
CXCL5P42830 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CXCL5P42830 AC007322.4-201ENST00000509611 723 ntBASIC13.11□□□□□ -0.31
CXCL5P42830 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CXCL5P42830 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.11□□□□□ -0.31
CXCL5P42830 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC13.11□□□□□ -0.31
CXCL5P42830 GALNS-213ENST00000569433 723 ntTSL 3 BASIC13.11□□□□□ -0.31
CXCL5P42830 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC13.11□□□□□ -0.31
CXCL5P42830 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.11□□□□□ -0.31
CXCL5P42830 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCL5P42830 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CXCL5P42830 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCL5P42830 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCL5P42830 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CXCL5P42830 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCL5P42830 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CXCL5P42830 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCL5P42830 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
CXCL5P42830 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.1□□□□□ -0.31
CXCL5P42830 PHGDH-210ENST00000641115 1638 ntBASIC13.1□□□□□ -0.31
CXCL5P42830 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 AC005332.8-201ENST00000622750 2735 ntBASIC13.1□□□□□ -0.31
CXCL5P42830 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC13.1□□□□□ -0.31
CXCL5P42830 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 MCRIP2P1-201ENST00000394346 511 ntBASIC13.1□□□□□ -0.31
CXCL5P42830 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.1□□□□□ -0.31
CXCL5P42830 TERF1P5-201ENST00000477545 1207 ntBASIC13.1□□□□□ -0.31
CXCL5P42830 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.1□□□□□ -0.31
CXCL5P42830 MFSD11-216ENST00000590393 1141 ntBASIC13.1□□□□□ -0.31
CXCL5P42830 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 UBE2DNL-204ENST00000602536 740 ntBASIC13.1□□□□□ -0.31
CXCL5P42830 AC013268.1-206ENST00000638368 961 ntBASIC13.1□□□□□ -0.31
CXCL5P42830 AC112229.1-201ENST00000639295 961 ntBASIC13.1□□□□□ -0.31
CXCL5P42830 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.1□□□□□ -0.31
CXCL5P42830 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
CXCL5P42830 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.1□□□□□ -0.31
CXCL5P42830 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC13.1□□□□□ -0.31
CXCL5P42830 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCL5P42830 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CXCL5P42830 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.09□□□□□ -0.31
CXCL5P42830 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCL5P42830 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
CXCL5P42830 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.09□□□□□ -0.31
CXCL5P42830 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CXCL5P42830 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CXCL5P42830 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCL5P42830 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CXCL5P42830 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CXCL5P42830 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CXCL5P42830 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCL5P42830 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CXCL5P42830 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.09□□□□□ -0.31
CXCL5P42830 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CXCL5P42830 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCL5P42830 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCL5P42830 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCL5P42830 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.09□□□□□ -0.31
CXCL5P42830 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.09□□□□□ -0.31
CXCL5P42830 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCL5P42830 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CXCL5P42830 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.09□□□□□ -0.31
CXCL5P42830 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CXCL5P42830 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.09□□□□□ -0.31
CXCL5P42830 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCL5P42830 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCL5P42830 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
CXCL5P42830 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CXCL5P42830 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms