Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
HOXD12P35452 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD12P35452 AC117947.1-201ENST00000427448 529 ntBASIC19.42■□□□□ 0.7
HOXD12P35452 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD12P35452 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD12P35452 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.42■□□□□ 0.7
HOXD12P35452 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
HOXD12P35452 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD12P35452 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXD12P35452 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.42■□□□□ 0.7
HOXD12P35452 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD12P35452 AL138966.2-201ENST00000621997 464 ntBASIC19.42■□□□□ 0.7
HOXD12P35452 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD12P35452 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD12P35452 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD12P35452 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.42■□□□□ 0.7
HOXD12P35452 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD12P35452 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD12P35452 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD12P35452 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD12P35452 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD12P35452 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.41■□□□□ 0.7
HOXD12P35452 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD12P35452 AC091390.4-202ENST00000476426 537 ntBASIC19.41■□□□□ 0.7
HOXD12P35452 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXD12P35452 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.41■□□□□ 0.7
HOXD12P35452 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXD12P35452 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.41■□□□□ 0.7
HOXD12P35452 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD12P35452 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD12P35452 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HOXD12P35452 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
HOXD12P35452 RCC2P6-201ENST00000526625 1557 ntBASIC19.4■□□□□ 0.7
HOXD12P35452 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD12P35452 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXD12P35452 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD12P35452 Z98882.1-201ENST00000622160 2253 ntBASIC19.4■□□□□ 0.7
HOXD12P35452 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD12P35452 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXD12P35452 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD12P35452 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXD12P35452 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD12P35452 AC004951.3-201ENST00000418645 1148 ntBASIC19.4■□□□□ 0.7
HOXD12P35452 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXD12P35452 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXD12P35452 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXD12P35452 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXD12P35452 AL512604.3-201ENST00000569583 964 ntBASIC19.4■□□□□ 0.7
HOXD12P35452 AC011298.2-201ENST00000617989 482 ntBASIC19.4■□□□□ 0.7
HOXD12P35452 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXD12P35452 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD12P35452 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD12P35452 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD12P35452 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD12P35452 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXD12P35452 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
HOXD12P35452 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXD12P35452 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD12P35452 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD12P35452 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HOXD12P35452 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD12P35452 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HOXD12P35452 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
HOXD12P35452 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.39■□□□□ 0.7
HOXD12P35452 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
HOXD12P35452 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
HOXD12P35452 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD12P35452 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD12P35452 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD12P35452 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD12P35452 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD12P35452 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD12P35452 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.39■□□□□ 0.69
HOXD12P35452 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXD12P35452 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.39■□□□□ 0.69
HOXD12P35452 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXD12P35452 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXD12P35452 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD12P35452 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXD12P35452 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXD12P35452 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HOXD12P35452 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD12P35452 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXD12P35452 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD12P35452 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
HOXD12P35452 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD12P35452 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD12P35452 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD12P35452 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms