Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHMP24386 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP24386 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.18■□□□□ 0.5
CHMP24386 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHMP24386 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CHMP24386 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP24386 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP24386 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CHMP24386 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CHMP24386 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.17■□□□□ 0.5
CHMP24386 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 SOX15-203ENST00000570788 1093 ntBASIC18.17■□□□□ 0.5
CHMP24386 AC008403.3-201ENST00000598924 454 ntBASIC18.17■□□□□ 0.5
CHMP24386 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CHMP24386 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP24386 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP24386 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.17■□□□□ 0.5
CHMP24386 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.17■□□□□ 0.5
CHMP24386 AC009237.14-201ENST00000609975 1594 ntBASIC18.17■□□□□ 0.5
CHMP24386 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CHMP24386 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CHMP24386 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.16■□□□□ 0.5
CHMP24386 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP24386 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP24386 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP24386 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHMP24386 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP24386 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.16■□□□□ 0.5
CHMP24386 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHMP24386 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.16■□□□□ 0.5
CHMP24386 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CHMP24386 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CHMP24386 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP24386 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.16■□□□□ 0.5
CHMP24386 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.16■□□□□ 0.5
CHMP24386 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP24386 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP24386 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP24386 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP24386 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CHMP24386 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.16■□□□□ 0.5
CHMP24386 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 AC093503.3-201ENST00000624917 2352 ntBASIC18.15■□□□□ 0.5
CHMP24386 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 KRT17P3-201ENST00000420566 1262 ntBASIC18.15■□□□□ 0.5
CHMP24386 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP24386 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP24386 AC006058.3-201ENST00000606217 1069 ntBASIC18.15■□□□□ 0.5
CHMP24386 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.15■□□□□ 0.5
CHMP24386 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP24386 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP24386 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CHMP24386 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP24386 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.15■□□□□ 0.5
CHMP24386 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
CHMP24386 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CHMP24386 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
CHMP24386 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHMP24386 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHMP24386 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CHMP24386 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP24386 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP24386 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP24386 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP24386 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CHMP24386 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.14■□□□□ 0.49
CHMP24386 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CHMP24386 AC008687.6-201ENST00000596318 630 ntBASIC18.14■□□□□ 0.49
CHMP24386 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms