Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPN1P18031 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
PTPN1P18031 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.64■□□□□ 0.9
PTPN1P18031 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN1P18031 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN1P18031 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN1P18031 AC004980.1-204ENST00000429707 299 ntBASIC20.64■□□□□ 0.89
PTPN1P18031 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN1P18031 TSPY15P-201ENST00000457163 923 ntBASIC20.64■□□□□ 0.89
PTPN1P18031 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN1P18031 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN1P18031 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.64■□□□□ 0.89
PTPN1P18031 AC131212.4-201ENST00000623606 975 ntBASIC20.64■□□□□ 0.89
PTPN1P18031 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.64■□□□□ 0.89
PTPN1P18031 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.64■□□□□ 0.89
PTPN1P18031 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN1P18031 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN1P18031 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN1P18031 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PTPN1P18031 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN1P18031 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN1P18031 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN1P18031 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN1P18031 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN1P18031 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PTPN1P18031 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN1P18031 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN1P18031 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPN1P18031 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN1P18031 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPN1P18031 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN1P18031 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.63■□□□□ 0.89
PTPN1P18031 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.63■□□□□ 0.89
PTPN1P18031 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PTPN1P18031 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN1P18031 AL355075.4-201ENST00000554988 638 ntBASIC20.63■□□□□ 0.89
PTPN1P18031 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN1P18031 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPN1P18031 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN1P18031 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
PTPN1P18031 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN1P18031 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN1P18031 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN1P18031 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN1P18031 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN1P18031 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN1P18031 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN1P18031 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PTPN1P18031 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.62■□□□□ 0.89
PTPN1P18031 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN1P18031 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.62■□□□□ 0.89
PTPN1P18031 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN1P18031 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN1P18031 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN1P18031 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN1P18031 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PTPN1P18031 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN1P18031 AC116562.2-201ENST00000507042 360 ntBASIC20.62■□□□□ 0.89
PTPN1P18031 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.62■□□□□ 0.89
PTPN1P18031 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.62■□□□□ 0.89
PTPN1P18031 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.62■□□□□ 0.89
PTPN1P18031 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.62■□□□□ 0.89
PTPN1P18031 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.62■□□□□ 0.89
PTPN1P18031 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.62■□□□□ 0.89
PTPN1P18031 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.62■□□□□ 0.89
PTPN1P18031 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN1P18031 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN1P18031 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN1P18031 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN1P18031 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN1P18031 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN1P18031 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN1P18031 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PTPN1P18031 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PTPN1P18031 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN1P18031 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN1P18031 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN1P18031 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN1P18031 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.61■□□□□ 0.89
PTPN1P18031 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.61■□□□□ 0.89
PTPN1P18031 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN1P18031 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN1P18031 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PTPN1P18031 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.61■□□□□ 0.89
PTPN1P18031 REXO1L10P-201ENST00000615707 1290 ntBASIC20.61■□□□□ 0.89
PTPN1P18031 REXO1L12P-201ENST00000622156 912 ntBASIC20.61■□□□□ 0.89
PTPN1P18031 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN1P18031 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN1P18031 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN1P18031 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN1P18031 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN1P18031 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN1P18031 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN1P18031 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN1P18031 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN1P18031 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PTPN1P18031 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN1P18031 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN1P18031 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN1P18031 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms