Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMC3P17980 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMC3P17980 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMC3P17980 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PSMC3P17980 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.29■□□□□ 0.84
PSMC3P17980 ECEL1P2-202ENST00000465689 757 ntBASIC20.29■□□□□ 0.84
PSMC3P17980 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMC3P17980 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMC3P17980 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PSMC3P17980 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMC3P17980 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PSMC3P17980 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMC3P17980 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
PSMC3P17980 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMC3P17980 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMC3P17980 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PSMC3P17980 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMC3P17980 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMC3P17980 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMC3P17980 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PSMC3P17980 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.28■□□□□ 0.84
PSMC3P17980 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PSMC3P17980 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PSMC3P17980 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.28■□□□□ 0.84
PSMC3P17980 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.28■□□□□ 0.84
PSMC3P17980 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMC3P17980 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.28■□□□□ 0.84
PSMC3P17980 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PSMC3P17980 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PSMC3P17980 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PSMC3P17980 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PSMC3P17980 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMC3P17980 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMC3P17980 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMC3P17980 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
PSMC3P17980 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMC3P17980 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.27■□□□□ 0.84
PSMC3P17980 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.27■□□□□ 0.84
PSMC3P17980 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMC3P17980 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMC3P17980 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMC3P17980 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.27■□□□□ 0.84
PSMC3P17980 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMC3P17980 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMC3P17980 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.27■□□□□ 0.84
PSMC3P17980 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
PSMC3P17980 AC087388.1-201ENST00000571370 1112 ntBASIC20.27■□□□□ 0.84
PSMC3P17980 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
PSMC3P17980 AC130371.2-201ENST00000619443 611 ntBASIC20.27■□□□□ 0.84
PSMC3P17980 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMC3P17980 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PSMC3P17980 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PSMC3P17980 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PSMC3P17980 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PSMC3P17980 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PSMC3P17980 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
PSMC3P17980 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
PSMC3P17980 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PSMC3P17980 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PSMC3P17980 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.26■□□□□ 0.83
PSMC3P17980 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PSMC3P17980 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMC3P17980 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
PSMC3P17980 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PSMC3P17980 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PSMC3P17980 AC007225.1-201ENST00000566331 1836 ntBASIC20.26■□□□□ 0.83
PSMC3P17980 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMC3P17980 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.26■□□□□ 0.83
PSMC3P17980 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PSMC3P17980 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMC3P17980 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.26■□□□□ 0.83
PSMC3P17980 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PSMC3P17980 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMC3P17980 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMC3P17980 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PSMC3P17980 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMC3P17980 PHGDH-210ENST00000641115 1638 ntBASIC20.26■□□□□ 0.83
PSMC3P17980 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMC3P17980 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PSMC3P17980 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.26■□□□□ 0.83
PSMC3P17980 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
PSMC3P17980 AC092720.2-201ENST00000602388 1665 ntBASIC20.26■□□□□ 0.83
PSMC3P17980 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PSMC3P17980 LINC01006-201ENST00000333319 2292 ntBASIC20.25■□□□□ 0.83
PSMC3P17980 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMC3P17980 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PSMC3P17980 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.25■□□□□ 0.83
PSMC3P17980 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.25■□□□□ 0.83
PSMC3P17980 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.25■□□□□ 0.83
PSMC3P17980 SLC25A1P4-201ENST00000567977 778 ntBASIC20.25■□□□□ 0.83
PSMC3P17980 AC006011.2-201ENST00000621313 1158 ntBASIC20.25■□□□□ 0.83
PSMC3P17980 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PSMC3P17980 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PSMC3P17980 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.25■□□□□ 0.83
PSMC3P17980 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMC3P17980 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMC3P17980 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PSMC3P17980 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.25■□□□□ 0.83
PSMC3P17980 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
PSMC3P17980 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms