Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH1P12830 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CDH1P12830 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH1P12830 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH1P12830 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH1P12830 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH1P12830 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH1P12830 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH1P12830 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH1P12830 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH1P12830 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH1P12830 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH1P12830 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH1P12830 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.96■□□□□ 0.63
CDH1P12830 AC006058.3-201ENST00000606217 1069 ntBASIC18.96■□□□□ 0.63
CDH1P12830 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH1P12830 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH1P12830 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH1P12830 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH1P12830 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH1P12830 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH1P12830 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH1P12830 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH1P12830 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CDH1P12830 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CDH1P12830 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH1P12830 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CDH1P12830 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH1P12830 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH1P12830 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDH1P12830 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH1P12830 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH1P12830 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH1P12830 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH1P12830 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH1P12830 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH1P12830 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH1P12830 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH1P12830 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDH1P12830 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH1P12830 POU5F1P3-201ENST00000428824 1078 ntBASIC18.95■□□□□ 0.62
CDH1P12830 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH1P12830 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.95■□□□□ 0.62
CDH1P12830 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH1P12830 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDH1P12830 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.95■□□□□ 0.62
CDH1P12830 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH1P12830 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.95■□□□□ 0.62
CDH1P12830 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDH1P12830 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CDH1P12830 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH1P12830 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH1P12830 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH1P12830 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH1P12830 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH1P12830 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDH1P12830 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CDH1P12830 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CDH1P12830 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
CDH1P12830 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CDH1P12830 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH1P12830 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CDH1P12830 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.94■□□□□ 0.62
CDH1P12830 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH1P12830 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH1P12830 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH1P12830 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH1P12830 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH1P12830 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH1P12830 TSPY20P-201ENST00000450910 630 ntBASIC18.94■□□□□ 0.62
CDH1P12830 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CDH1P12830 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.94■□□□□ 0.62
CDH1P12830 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH1P12830 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CDH1P12830 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH1P12830 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH1P12830 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH1P12830 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH1P12830 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH1P12830 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH1P12830 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH1P12830 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CDH1P12830 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH1P12830 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH1P12830 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH1P12830 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH1P12830 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH1P12830 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.93■□□□□ 0.62
CDH1P12830 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH1P12830 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.93■□□□□ 0.62
CDH1P12830 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH1P12830 AC073648.6-201ENST00000641589 218 ntBASIC18.93■□□□□ 0.62
CDH1P12830 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH1P12830 AC004408.2-201ENST00000623613 2777 ntBASIC18.93■□□□□ 0.62
CDH1P12830 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDH1P12830 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH1P12830 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH1P12830 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH1P12830 AP006587.1-201ENST00000534129 1502 ntBASIC18.93■□□□□ 0.62
CDH1P12830 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms