Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
CSB-PGBD3P0DP91 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CSB-PGBD3P0DP91 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CSB-PGBD3P0DP91 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CSB-PGBD3P0DP91 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
CSB-PGBD3P0DP91 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC25.85■■□□□ 1.73
CSB-PGBD3P0DP91 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CSB-PGBD3P0DP91 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC25.85■■□□□ 1.73
CSB-PGBD3P0DP91 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
CSB-PGBD3P0DP91 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CSB-PGBD3P0DP91 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CSB-PGBD3P0DP91 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
CSB-PGBD3P0DP91 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CSB-PGBD3P0DP91 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC25.84■■□□□ 1.73
CSB-PGBD3P0DP91 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC25.84■■□□□ 1.73
CSB-PGBD3P0DP91 BET1L-202ENST00000332865 533 ntTSL 5 BASIC25.84■■□□□ 1.73
CSB-PGBD3P0DP91 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CSB-PGBD3P0DP91 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CSB-PGBD3P0DP91 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CSB-PGBD3P0DP91 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CSB-PGBD3P0DP91 KRT8P45-201ENST00000414328 1447 ntBASIC25.84■■□□□ 1.73
CSB-PGBD3P0DP91 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CSB-PGBD3P0DP91 PRSS44-201ENST00000515154 1146 ntBASIC25.84■■□□□ 1.73
CSB-PGBD3P0DP91 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC25.84■■□□□ 1.73
CSB-PGBD3P0DP91 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CSB-PGBD3P0DP91 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CSB-PGBD3P0DP91 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CSB-PGBD3P0DP91 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 AC079834.2-201ENST00000609776 1949 ntBASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 AL450487.1-201ENST00000426799 995 ntBASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 DAP-202ENST00000432074 1048 ntTSL 2 BASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 GLRB-205ENST00000512619 728 ntTSL 3 BASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 CKBP1-201ENST00000565489 1086 ntBASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 AC008622.2-201ENST00000617006 1229 ntBASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 AC116407.4-201ENST00000623319 1061 ntBASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CSB-PGBD3P0DP91 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CSB-PGBD3P0DP91 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CSB-PGBD3P0DP91 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 NME1-207ENST00000480143 964 ntTSL 2 BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 VENTXP5-201ENST00000523979 775 ntBASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 AC012676.1-201ENST00000574705 1949 ntBASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 BX119927.1-201ENST00000636596 1552 ntBASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC25.82■■□□□ 1.72
CSB-PGBD3P0DP91 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CSB-PGBD3P0DP91 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CSB-PGBD3P0DP91 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC25.81■■□□□ 1.72
CSB-PGBD3P0DP91 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CSB-PGBD3P0DP91 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CSB-PGBD3P0DP91 Telomerase-vert.1-201ENST00000363312 438 ntBASIC25.81■■□□□ 1.72
CSB-PGBD3P0DP91 PP7080-204ENST00000510714 601 ntTSL 3 BASIC25.81■■□□□ 1.72
CSB-PGBD3P0DP91 AC069148.1-201ENST00000608741 768 ntBASIC25.81■■□□□ 1.72
CSB-PGBD3P0DP91 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC25.81■■□□□ 1.72
CSB-PGBD3P0DP91 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC25.81■■□□□ 1.72
CSB-PGBD3P0DP91 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
CSB-PGBD3P0DP91 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CSB-PGBD3P0DP91 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC25.81■■□□□ 1.72
CSB-PGBD3P0DP91 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC25.8■■□□□ 1.72
CSB-PGBD3P0DP91 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CSB-PGBD3P0DP91 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CSB-PGBD3P0DP91 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC25.8■■□□□ 1.72
CSB-PGBD3P0DP91 SNX5-210ENST00000481323 562 ntTSL 3 BASIC25.8■■□□□ 1.72
CSB-PGBD3P0DP91 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CSB-PGBD3P0DP91 CLEC4GP1-201ENST00000596555 870 ntBASIC25.8■■□□□ 1.72
CSB-PGBD3P0DP91 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC25.8■■□□□ 1.72
CSB-PGBD3P0DP91 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
CSB-PGBD3P0DP91 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CSB-PGBD3P0DP91 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CSB-PGBD3P0DP91 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC25.8■■□□□ 1.72
CSB-PGBD3P0DP91 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
CSB-PGBD3P0DP91 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
CSB-PGBD3P0DP91 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC25.8■■□□□ 1.72
CSB-PGBD3P0DP91 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms