Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
APPP05067 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
APPP05067 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.37■■□□□ 1.33
APPP05067 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
APPP05067 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
APPP05067 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.36■■□□□ 1.33
APPP05067 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
APPP05067 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
APPP05067 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
APPP05067 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
APPP05067 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
APPP05067 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
APPP05067 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
APPP05067 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC23.36■■□□□ 1.33
APPP05067 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
APPP05067 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.36■■□□□ 1.33
APPP05067 AC012618.2-201ENST00000428058 849 ntBASIC23.36■■□□□ 1.33
APPP05067 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
APPP05067 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC23.36■■□□□ 1.33
APPP05067 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC23.36■■□□□ 1.33
APPP05067 AP001412.1-201ENST00000608405 714 ntBASIC23.36■■□□□ 1.33
APPP05067 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC23.36■■□□□ 1.33
APPP05067 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
APPP05067 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC23.36■■□□□ 1.33
APPP05067 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
APPP05067 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC23.36■■□□□ 1.33
APPP05067 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.36■■□□□ 1.33
APPP05067 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
APPP05067 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.35■■□□□ 1.33
APPP05067 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
APPP05067 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
APPP05067 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.35■■□□□ 1.33
APPP05067 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.35■■□□□ 1.33
APPP05067 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
APPP05067 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
APPP05067 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
APPP05067 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.35■■□□□ 1.33
APPP05067 AL353807.1-201ENST00000427475 662 ntBASIC23.35■■□□□ 1.33
APPP05067 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
APPP05067 FDX2-207ENST00000494368 584 ntTSL 4 BASIC23.35■■□□□ 1.33
APPP05067 RPS15-203ENST00000586096 570 ntTSL 2 BASIC23.35■■□□□ 1.33
APPP05067 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
APPP05067 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
APPP05067 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
APPP05067 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
APPP05067 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
APPP05067 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.34■■□□□ 1.33
APPP05067 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
APPP05067 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
APPP05067 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
APPP05067 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
APPP05067 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
APPP05067 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.34■■□□□ 1.33
APPP05067 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
APPP05067 SAPCD2P4-201ENST00000424595 1171 ntBASIC23.34■■□□□ 1.33
APPP05067 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC23.34■■□□□ 1.33
APPP05067 C1QL1P1-201ENST00000568105 661 ntBASIC23.34■■□□□ 1.33
APPP05067 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.34■■□□□ 1.33
APPP05067 AL049637.2-201ENST00000641778 930 ntBASIC23.34■■□□□ 1.33
APPP05067 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
APPP05067 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
APPP05067 AFG3L1P-217ENST00000557444 2447 ntBASIC23.34■■□□□ 1.33
APPP05067 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC23.34■■□□□ 1.33
APPP05067 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
APPP05067 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
APPP05067 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
APPP05067 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC23.33■■□□□ 1.33
APPP05067 KRT8P8-201ENST00000434750 1448 ntBASIC23.33■■□□□ 1.33
APPP05067 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC23.33■■□□□ 1.33
APPP05067 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
APPP05067 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
APPP05067 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
APPP05067 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
APPP05067 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.33■■□□□ 1.33
APPP05067 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC23.33■■□□□ 1.33
APPP05067 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
APPP05067 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.33■■□□□ 1.33
APPP05067 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
APPP05067 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
APPP05067 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
APPP05067 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.33■■□□□ 1.32
APPP05067 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
APPP05067 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.32■■□□□ 1.32
APPP05067 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
APPP05067 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.32■■□□□ 1.32
APPP05067 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
APPP05067 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
APPP05067 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
APPP05067 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
APPP05067 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
APPP05067 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
APPP05067 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
APPP05067 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
APPP05067 AL596275.1-201ENST00000423464 877 ntBASIC23.32■■□□□ 1.32
APPP05067 SNORA78-201ENST00000459373 127 ntBASIC23.32■■□□□ 1.32
APPP05067 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC23.32■■□□□ 1.32
APPP05067 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.32■■□□□ 1.32
APPP05067 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
APPP05067 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
APPP05067 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms