Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 AL139246.5-201ENST00000606645 996 ntBASIC16.82■□□□□ 0.28
HLA-DQB1P01920 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
HLA-DQB1P01920 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 AC087633.2-202ENST00000565166 1439 ntBASIC16.81■□□□□ 0.28
HLA-DQB1P01920 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 AL512353.2-201ENST00000448759 1962 ntBASIC16.81■□□□□ 0.28
HLA-DQB1P01920 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 AC027612.3-201ENST00000413684 1047 ntBASIC16.81■□□□□ 0.28
HLA-DQB1P01920 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 AP001160.3-201ENST00000601484 763 ntBASIC16.81■□□□□ 0.28
HLA-DQB1P01920 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 TEX21P-204ENST00000641479 1693 ntBASIC16.81■□□□□ 0.28
HLA-DQB1P01920 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HLA-DQB1P01920 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 CDV3P1-201ENST00000471403 739 ntBASIC16.8■□□□□ 0.28
HLA-DQB1P01920 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 KRT18P20-201ENST00000548986 1279 ntBASIC16.8■□□□□ 0.28
HLA-DQB1P01920 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 AC142381.2-201ENST00000566120 298 ntBASIC16.8■□□□□ 0.28
HLA-DQB1P01920 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 AC104187.1-201ENST00000607510 612 ntBASIC16.8■□□□□ 0.28
HLA-DQB1P01920 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HLA-DQB1P01920 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HLA-DQB1P01920 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms