Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.12■□□□□ 0.65
CPNE6O95741 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE6O95741 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE6O95741 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CPNE6O95741 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CPNE6O95741 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE6O95741 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE6O95741 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE6O95741 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE6O95741 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CPNE6O95741 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE6O95741 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE6O95741 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE6O95741 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE6O95741 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE6O95741 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CPNE6O95741 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.11■□□□□ 0.65
CPNE6O95741 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE6O95741 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE6O95741 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.11■□□□□ 0.65
CPNE6O95741 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE6O95741 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CPNE6O95741 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE6O95741 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE6O95741 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE6O95741 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE6O95741 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE6O95741 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE6O95741 AL162377.1-201ENST00000618844 1793 ntBASIC19.11■□□□□ 0.65
CPNE6O95741 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CPNE6O95741 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE6O95741 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE6O95741 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE6O95741 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.1■□□□□ 0.65
CPNE6O95741 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE6O95741 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE6O95741 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE6O95741 MMP23A-201ENST00000234610 1017 ntBASIC19.1■□□□□ 0.65
CPNE6O95741 MIR1224-201ENST00000408193 85 ntBASIC19.1■□□□□ 0.65
CPNE6O95741 NUDT16P1-203ENST00000513809 620 ntBASIC19.1■□□□□ 0.65
CPNE6O95741 KRT18P21-201ENST00000515767 1272 ntBASIC19.1■□□□□ 0.65
CPNE6O95741 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CPNE6O95741 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CPNE6O95741 AC012306.2-201ENST00000609350 630 ntBASIC19.1■□□□□ 0.65
CPNE6O95741 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE6O95741 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE6O95741 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE6O95741 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE6O95741 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE6O95741 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.1■□□□□ 0.65
CPNE6O95741 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE6O95741 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
CPNE6O95741 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE6O95741 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CPNE6O95741 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE6O95741 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE6O95741 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE6O95741 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE6O95741 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE6O95741 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE6O95741 AC112907.3-201ENST00000577781 2400 ntBASIC19.09■□□□□ 0.65
CPNE6O95741 DPP3P2-201ENST00000416030 1696 ntBASIC19.09■□□□□ 0.65
CPNE6O95741 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CPNE6O95741 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE6O95741 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE6O95741 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.09■□□□□ 0.65
CPNE6O95741 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.09■□□□□ 0.65
CPNE6O95741 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.09■□□□□ 0.65
CPNE6O95741 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE6O95741 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE6O95741 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.09■□□□□ 0.65
CPNE6O95741 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE6O95741 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE6O95741 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE6O95741 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE6O95741 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE6O95741 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.09■□□□□ 0.65
CPNE6O95741 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE6O95741 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.08■□□□□ 0.65
CPNE6O95741 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE6O95741 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE6O95741 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.08■□□□□ 0.65
CPNE6O95741 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE6O95741 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
CPNE6O95741 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE6O95741 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE6O95741 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE6O95741 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE6O95741 NIFKP9-201ENST00000419265 221 ntBASIC19.08■□□□□ 0.64
CPNE6O95741 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.08■□□□□ 0.64
CPNE6O95741 KSR1P1-201ENST00000446298 240 ntBASIC19.08■□□□□ 0.64
CPNE6O95741 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.08■□□□□ 0.64
CPNE6O95741 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.08■□□□□ 0.64
CPNE6O95741 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.08■□□□□ 0.64
CPNE6O95741 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.08■□□□□ 0.64
CPNE6O95741 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.08■□□□□ 0.64
CPNE6O95741 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.08■□□□□ 0.64
CPNE6O95741 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
CPNE6O95741 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.08■□□□□ 0.64
CPNE6O95741 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms