Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ABCA1O95477 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ABCA1O95477 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ABCA1O95477 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ABCA1O95477 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ABCA1O95477 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
ABCA1O95477 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ABCA1O95477 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ABCA1O95477 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ABCA1O95477 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.3■□□□□ 0.2
ABCA1O95477 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ABCA1O95477 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ABCA1O95477 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.3■□□□□ 0.2
ABCA1O95477 FAM8A6P-201ENST00000407496 1135 ntBASIC16.3■□□□□ 0.2
ABCA1O95477 HMGA1P5-201ENST00000412453 271 ntBASIC16.3■□□□□ 0.2
ABCA1O95477 AC117947.1-201ENST00000427448 529 ntBASIC16.3■□□□□ 0.2
ABCA1O95477 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.3■□□□□ 0.2
ABCA1O95477 AL121894.2-201ENST00000602977 491 ntBASIC16.3■□□□□ 0.2
ABCA1O95477 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.3■□□□□ 0.2
ABCA1O95477 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
ABCA1O95477 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ABCA1O95477 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 TSPY14P-201ENST00000303979 915 ntBASIC16.29■□□□□ 0.2
ABCA1O95477 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.29■□□□□ 0.2
ABCA1O95477 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
ABCA1O95477 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ABCA1O95477 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.29■□□□□ 0.2
ABCA1O95477 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.29■□□□□ 0.2
ABCA1O95477 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
ABCA1O95477 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
ABCA1O95477 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
ABCA1O95477 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC16.29■□□□□ 0.2
ABCA1O95477 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
ABCA1O95477 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.29■□□□□ 0.2
ABCA1O95477 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ABCA1O95477 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.29■□□□□ 0.2
ABCA1O95477 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.29■□□□□ 0.2
ABCA1O95477 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.29■□□□□ 0.2
ABCA1O95477 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.29■□□□□ 0.2
ABCA1O95477 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.29■□□□□ 0.2
ABCA1O95477 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.29■□□□□ 0.2
ABCA1O95477 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.29■□□□□ 0.2
ABCA1O95477 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
ABCA1O95477 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.29■□□□□ 0.2
ABCA1O95477 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ABCA1O95477 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.28■□□□□ 0.2
ABCA1O95477 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ABCA1O95477 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.28■□□□□ 0.2
ABCA1O95477 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.28■□□□□ 0.2
ABCA1O95477 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC16.28■□□□□ 0.2
ABCA1O95477 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
ABCA1O95477 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
ABCA1O95477 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ABCA1O95477 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ABCA1O95477 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ABCA1O95477 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.28■□□□□ 0.2
ABCA1O95477 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.28■□□□□ 0.2
ABCA1O95477 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ABCA1O95477 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ABCA1O95477 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.28■□□□□ 0.2
ABCA1O95477 AC116407.4-201ENST00000623319 1061 ntBASIC16.28■□□□□ 0.2
ABCA1O95477 AP000550.4-202ENST00000639755 178 ntBASIC16.28■□□□□ 0.2
ABCA1O95477 AC006128.1-201ENST00000624704 1661 ntBASIC16.27■□□□□ 0.2
ABCA1O95477 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ABCA1O95477 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
ABCA1O95477 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.27■□□□□ 0.2
ABCA1O95477 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms