Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.41■□□□□ 0.7
NDUFS3O75489 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS3O75489 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS3O75489 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS3O75489 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
NDUFS3O75489 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS3O75489 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS3O75489 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS3O75489 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS3O75489 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS3O75489 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS3O75489 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NDUFS3O75489 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.41■□□□□ 0.7
NDUFS3O75489 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS3O75489 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
NDUFS3O75489 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.4■□□□□ 0.7
NDUFS3O75489 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.4■□□□□ 0.7
NDUFS3O75489 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS3O75489 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS3O75489 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS3O75489 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS3O75489 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.4■□□□□ 0.7
NDUFS3O75489 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NDUFS3O75489 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.4■□□□□ 0.7
NDUFS3O75489 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NDUFS3O75489 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.4■□□□□ 0.7
NDUFS3O75489 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
NDUFS3O75489 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.4■□□□□ 0.7
NDUFS3O75489 PRKY-204ENST00000533551 1019 ntBASIC19.4■□□□□ 0.7
NDUFS3O75489 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
NDUFS3O75489 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.4■□□□□ 0.7
NDUFS3O75489 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.4■□□□□ 0.7
NDUFS3O75489 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.4■□□□□ 0.7
NDUFS3O75489 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.4■□□□□ 0.7
NDUFS3O75489 AC008403.3-201ENST00000598924 454 ntBASIC19.4■□□□□ 0.7
NDUFS3O75489 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS3O75489 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS3O75489 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS3O75489 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS3O75489 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS3O75489 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.4■□□□□ 0.7
NDUFS3O75489 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS3O75489 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS3O75489 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS3O75489 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.4■□□□□ 0.7
NDUFS3O75489 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NDUFS3O75489 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NDUFS3O75489 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
NDUFS3O75489 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.39■□□□□ 0.7
NDUFS3O75489 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.7
NDUFS3O75489 AC005332.7-201ENST00000614046 2005 ntBASIC19.39■□□□□ 0.69
NDUFS3O75489 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS3O75489 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS3O75489 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS3O75489 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.39■□□□□ 0.69
NDUFS3O75489 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NDUFS3O75489 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS3O75489 KRT17P3-201ENST00000420566 1262 ntBASIC19.39■□□□□ 0.69
NDUFS3O75489 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.39■□□□□ 0.69
NDUFS3O75489 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.39■□□□□ 0.69
NDUFS3O75489 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.39■□□□□ 0.69
NDUFS3O75489 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS3O75489 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS3O75489 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.39■□□□□ 0.69
NDUFS3O75489 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS3O75489 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS3O75489 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS3O75489 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS3O75489 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.39■□□□□ 0.69
NDUFS3O75489 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS3O75489 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
NDUFS3O75489 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NDUFS3O75489 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NDUFS3O75489 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.38■□□□□ 0.69
NDUFS3O75489 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NDUFS3O75489 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDUFS3O75489 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
NDUFS3O75489 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDUFS3O75489 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NDUFS3O75489 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDUFS3O75489 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.38■□□□□ 0.69
NDUFS3O75489 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDUFS3O75489 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
NDUFS3O75489 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NDUFS3O75489 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.38■□□□□ 0.69
NDUFS3O75489 AC026366.1-201ENST00000488803 879 ntBASIC19.38■□□□□ 0.69
NDUFS3O75489 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.38■□□□□ 0.69
NDUFS3O75489 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.38■□□□□ 0.69
NDUFS3O75489 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NDUFS3O75489 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NDUFS3O75489 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.38■□□□□ 0.69
NDUFS3O75489 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NDUFS3O75489 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDUFS3O75489 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NDUFS3O75489 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDUFS3O75489 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDUFS3O75489 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDUFS3O75489 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NDUFS3O75489 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NDUFS3O75489 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms