Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFC3H1O60293 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFC3H1O60293 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFC3H1O60293 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFC3H1O60293 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFC3H1O60293 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFC3H1O60293 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFC3H1O60293 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFC3H1O60293 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ZFC3H1O60293 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
ZFC3H1O60293 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFC3H1O60293 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFC3H1O60293 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFC3H1O60293 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ZFC3H1O60293 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFC3H1O60293 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZFC3H1O60293 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
ZFC3H1O60293 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.26■□□□□ 0.67
ZFC3H1O60293 MIR4785-201ENST00000585005 73 ntBASIC19.26■□□□□ 0.67
ZFC3H1O60293 CD177P1-201ENST00000606252 935 ntBASIC19.26■□□□□ 0.67
ZFC3H1O60293 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.26■□□□□ 0.67
ZFC3H1O60293 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZFC3H1O60293 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZFC3H1O60293 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFC3H1O60293 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.25■□□□□ 0.67
ZFC3H1O60293 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFC3H1O60293 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFC3H1O60293 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZFC3H1O60293 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.25■□□□□ 0.67
ZFC3H1O60293 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.25■□□□□ 0.67
ZFC3H1O60293 AF186192.3-201ENST00000583427 947 ntBASIC19.25■□□□□ 0.67
ZFC3H1O60293 LINC01023-201ENST00000606054 436 ntBASIC19.25■□□□□ 0.67
ZFC3H1O60293 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.25■□□□□ 0.67
ZFC3H1O60293 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFC3H1O60293 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFC3H1O60293 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
ZFC3H1O60293 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFC3H1O60293 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
ZFC3H1O60293 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ZFC3H1O60293 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZFC3H1O60293 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZFC3H1O60293 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZFC3H1O60293 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZFC3H1O60293 AC211429.1-201ENST00000415277 523 ntBASIC19.24■□□□□ 0.67
ZFC3H1O60293 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZFC3H1O60293 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ZFC3H1O60293 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZFC3H1O60293 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
ZFC3H1O60293 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZFC3H1O60293 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ZFC3H1O60293 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.24■□□□□ 0.67
ZFC3H1O60293 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZFC3H1O60293 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZFC3H1O60293 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
ZFC3H1O60293 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZFC3H1O60293 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ZFC3H1O60293 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZFC3H1O60293 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ZFC3H1O60293 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.24■□□□□ 0.67
ZFC3H1O60293 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.24■□□□□ 0.67
ZFC3H1O60293 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZFC3H1O60293 AC010331.1-201ENST00000611423 582 ntBASIC19.24■□□□□ 0.67
ZFC3H1O60293 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZFC3H1O60293 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZFC3H1O60293 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZFC3H1O60293 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZFC3H1O60293 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZFC3H1O60293 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.23■□□□□ 0.67
ZFC3H1O60293 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ZFC3H1O60293 AC116562.2-201ENST00000507042 360 ntBASIC19.23■□□□□ 0.67
ZFC3H1O60293 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.23■□□□□ 0.67
ZFC3H1O60293 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.23■□□□□ 0.67
ZFC3H1O60293 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.23■□□□□ 0.67
ZFC3H1O60293 AP001412.1-201ENST00000608405 714 ntBASIC19.23■□□□□ 0.67
ZFC3H1O60293 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ZFC3H1O60293 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 AC098818.2-201ENST00000564925 2320 ntBASIC19.23■□□□□ 0.67
ZFC3H1O60293 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.23■□□□□ 0.67
ZFC3H1O60293 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.23■□□□□ 0.67
ZFC3H1O60293 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ZFC3H1O60293 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZFC3H1O60293 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ZFC3H1O60293 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.23■□□□□ 0.67
ZFC3H1O60293 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.23■□□□□ 0.67
ZFC3H1O60293 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms