Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDELR3O43731 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDELR3O43731 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDELR3O43731 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
KDELR3O43731 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.79■□□□□ 0.76
KDELR3O43731 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.79■□□□□ 0.76
KDELR3O43731 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.79■□□□□ 0.76
KDELR3O43731 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDELR3O43731 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.79■□□□□ 0.76
KDELR3O43731 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.79■□□□□ 0.76
KDELR3O43731 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.79■□□□□ 0.76
KDELR3O43731 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.79■□□□□ 0.76
KDELR3O43731 MIR4497-201ENST00000583208 89 ntBASIC19.79■□□□□ 0.76
KDELR3O43731 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.79■□□□□ 0.76
KDELR3O43731 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.79■□□□□ 0.76
KDELR3O43731 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDELR3O43731 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDELR3O43731 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
KDELR3O43731 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
KDELR3O43731 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDELR3O43731 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
KDELR3O43731 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
KDELR3O43731 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
KDELR3O43731 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
KDELR3O43731 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 AL596275.1-201ENST00000423464 877 ntBASIC19.78■□□□□ 0.76
KDELR3O43731 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.78■□□□□ 0.76
KDELR3O43731 AC004980.1-204ENST00000429707 299 ntBASIC19.78■□□□□ 0.76
KDELR3O43731 SNORA78-201ENST00000459373 127 ntBASIC19.78■□□□□ 0.76
KDELR3O43731 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.78■□□□□ 0.76
KDELR3O43731 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.78■□□□□ 0.76
KDELR3O43731 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.78■□□□□ 0.76
KDELR3O43731 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 AC131212.4-201ENST00000623606 975 ntBASIC19.78■□□□□ 0.76
KDELR3O43731 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
KDELR3O43731 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.78■□□□□ 0.76
KDELR3O43731 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDELR3O43731 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
KDELR3O43731 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.77■□□□□ 0.76
KDELR3O43731 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KDELR3O43731 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDELR3O43731 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KDELR3O43731 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDELR3O43731 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDELR3O43731 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.77■□□□□ 0.76
KDELR3O43731 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.77■□□□□ 0.76
KDELR3O43731 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDELR3O43731 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KDELR3O43731 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDELR3O43731 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.77■□□□□ 0.76
KDELR3O43731 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDELR3O43731 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDELR3O43731 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDELR3O43731 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDELR3O43731 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
KDELR3O43731 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
KDELR3O43731 TSPY7P-201ENST00000431358 1114 ntBASIC19.77■□□□□ 0.76
KDELR3O43731 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
KDELR3O43731 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDELR3O43731 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.77■□□□□ 0.76
KDELR3O43731 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
KDELR3O43731 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDELR3O43731 AL160286.2-201ENST00000567150 934 ntBASIC19.77■□□□□ 0.76
KDELR3O43731 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
KDELR3O43731 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.77■□□□□ 0.76
KDELR3O43731 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
KDELR3O43731 AL031985.4-201ENST00000642138 673 ntBASIC19.77■□□□□ 0.76
KDELR3O43731 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.77■□□□□ 0.76
KDELR3O43731 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDELR3O43731 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDELR3O43731 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.76■□□□□ 0.75
KDELR3O43731 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KDELR3O43731 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.76■□□□□ 0.75
KDELR3O43731 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDELR3O43731 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDELR3O43731 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
KDELR3O43731 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
KDELR3O43731 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
KDELR3O43731 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
KDELR3O43731 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
KDELR3O43731 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.76■□□□□ 0.75
KDELR3O43731 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.76■□□□□ 0.75
KDELR3O43731 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.76■□□□□ 0.75
KDELR3O43731 AL158211.5-201ENST00000623583 2518 ntBASIC19.76■□□□□ 0.75
KDELR3O43731 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms