Protein–RNA interactions for Protein: O43303

CCP110, Centriolar coiled-coil protein of 110 kDa, humanhuman

Predictions only

Length 1,012 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110O43303 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCP110O43303 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CCP110O43303 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.39■■□□□ 1.01
CCP110O43303 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCP110O43303 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCP110O43303 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCP110O43303 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.39■■□□□ 1.01
CCP110O43303 AC068338.2-201ENST00000563278 1430 ntBASIC21.38■■□□□ 1.01
CCP110O43303 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CCP110O43303 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.38■■□□□ 1.01
CCP110O43303 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.38■■□□□ 1.01
CCP110O43303 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.38■■□□□ 1.01
CCP110O43303 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.38■■□□□ 1.01
CCP110O43303 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.38■■□□□ 1.01
CCP110O43303 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.38■■□□□ 1.01
CCP110O43303 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.38■■□□□ 1.01
CCP110O43303 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CCP110O43303 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
CCP110O43303 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCP110O43303 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CCP110O43303 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CCP110O43303 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.37■■□□□ 1.01
CCP110O43303 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.37■■□□□ 1.01
CCP110O43303 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.37■■□□□ 1.01
CCP110O43303 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.37■■□□□ 1.01
CCP110O43303 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.37■■□□□ 1.01
CCP110O43303 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 AC004911.1-201ENST00000416316 871 ntBASIC21.37■■□□□ 1.01
CCP110O43303 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.37■■□□□ 1.01
CCP110O43303 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.37■■□□□ 1.01
CCP110O43303 AL162412.1-201ENST00000567129 965 ntBASIC21.37■■□□□ 1.01
CCP110O43303 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CCP110O43303 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.37■■□□□ 1.01
CCP110O43303 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCP110O43303 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.37■■□□□ 1.01
CCP110O43303 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.37■■□□□ 1.01
CCP110O43303 AC007613.1-201ENST00000572811 2597 ntBASIC21.37■■□□□ 1.01
CCP110O43303 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.37■■□□□ 1.01
CCP110O43303 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCP110O43303 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCP110O43303 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.36■■□□□ 1.01
CCP110O43303 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
CCP110O43303 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCP110O43303 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCP110O43303 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCP110O43303 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCP110O43303 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.36■■□□□ 1.01
CCP110O43303 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
CCP110O43303 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.36■■□□□ 1.01
CCP110O43303 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.36■■□□□ 1.01
CCP110O43303 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCP110O43303 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCP110O43303 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCP110O43303 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.36■■□□□ 1.01
CCP110O43303 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCP110O43303 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CCP110O43303 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCP110O43303 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.36■■□□□ 1.01
CCP110O43303 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCP110O43303 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCP110O43303 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCP110O43303 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC21.35■■□□□ 1.01
CCP110O43303 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CCP110O43303 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCP110O43303 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CCP110O43303 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CCP110O43303 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms