Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMAD9O15198 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SMAD9O15198 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.64■□□□□ 0.41
SMAD9O15198 AC098590.1-201ENST00000468126 897 ntBASIC17.64■□□□□ 0.41
SMAD9O15198 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.64■□□□□ 0.41
SMAD9O15198 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.64■□□□□ 0.41
SMAD9O15198 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SMAD9O15198 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
SMAD9O15198 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.64■□□□□ 0.41
SMAD9O15198 C1QBPP2-201ENST00000528754 825 ntBASIC17.64■□□□□ 0.41
SMAD9O15198 PRKY-204ENST00000533551 1019 ntBASIC17.64■□□□□ 0.41
SMAD9O15198 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD9O15198 AL023875.1-201ENST00000640777 796 ntBASIC17.64■□□□□ 0.41
SMAD9O15198 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.64■□□□□ 0.41
SMAD9O15198 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD9O15198 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD9O15198 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
SMAD9O15198 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
SMAD9O15198 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD9O15198 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD9O15198 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMAD9O15198 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMAD9O15198 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SMAD9O15198 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SMAD9O15198 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.63■□□□□ 0.41
SMAD9O15198 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.63■□□□□ 0.41
SMAD9O15198 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMAD9O15198 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SMAD9O15198 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.63■□□□□ 0.41
SMAD9O15198 AC239809.2-201ENST00000415381 517 ntBASIC17.63■□□□□ 0.41
SMAD9O15198 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.63■□□□□ 0.41
SMAD9O15198 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.63■□□□□ 0.41
SMAD9O15198 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.63■□□□□ 0.41
SMAD9O15198 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.63■□□□□ 0.41
SMAD9O15198 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.63■□□□□ 0.41
SMAD9O15198 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.63■□□□□ 0.41
SMAD9O15198 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMAD9O15198 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.63■□□□□ 0.41
SMAD9O15198 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.63■□□□□ 0.41
SMAD9O15198 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.63■□□□□ 0.41
SMAD9O15198 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.63■□□□□ 0.41
SMAD9O15198 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMAD9O15198 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD9O15198 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.62■□□□□ 0.41
SMAD9O15198 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.62■□□□□ 0.41
SMAD9O15198 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD9O15198 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD9O15198 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD9O15198 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD9O15198 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD9O15198 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD9O15198 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD9O15198 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.62■□□□□ 0.41
SMAD9O15198 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.62■□□□□ 0.41
SMAD9O15198 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.62■□□□□ 0.41
SMAD9O15198 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SMAD9O15198 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.62■□□□□ 0.41
SMAD9O15198 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SMAD9O15198 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD9O15198 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SMAD9O15198 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SMAD9O15198 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD9O15198 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SMAD9O15198 AC009237.14-201ENST00000609975 1594 ntBASIC17.62■□□□□ 0.41
SMAD9O15198 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SMAD9O15198 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD9O15198 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD9O15198 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SMAD9O15198 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD9O15198 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD9O15198 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD9O15198 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD9O15198 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD9O15198 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD9O15198 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SMAD9O15198 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD9O15198 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD9O15198 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SMAD9O15198 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.61■□□□□ 0.41
SMAD9O15198 KRASP1-201ENST00000407852 552 ntBASIC17.61■□□□□ 0.41
SMAD9O15198 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.61■□□□□ 0.41
SMAD9O15198 RPPH1-201ENST00000516869 333 ntBASIC17.61■□□□□ 0.41
SMAD9O15198 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.61■□□□□ 0.41
SMAD9O15198 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
SMAD9O15198 AC124016.1-201ENST00000609552 612 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms