Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.2■□□□□ 0.34
ABCD4O14678 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.2■□□□□ 0.34
ABCD4O14678 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ABCD4O14678 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCD4O14678 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.2■□□□□ 0.34
ABCD4O14678 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ABCD4O14678 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCD4O14678 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCD4O14678 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
ABCD4O14678 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.2■□□□□ 0.34
ABCD4O14678 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ABCD4O14678 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCD4O14678 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCD4O14678 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
ABCD4O14678 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
ABCD4O14678 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCD4O14678 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCD4O14678 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
ABCD4O14678 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
ABCD4O14678 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
ABCD4O14678 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.19■□□□□ 0.34
ABCD4O14678 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.19■□□□□ 0.34
ABCD4O14678 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
ABCD4O14678 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ABCD4O14678 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 RARRES2P10-201ENST00000564312 460 ntBASIC17.19■□□□□ 0.34
ABCD4O14678 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.19■□□□□ 0.34
ABCD4O14678 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.19■□□□□ 0.34
ABCD4O14678 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
ABCD4O14678 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.19■□□□□ 0.34
ABCD4O14678 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.19■□□□□ 0.34
ABCD4O14678 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
ABCD4O14678 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.19■□□□□ 0.34
ABCD4O14678 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
ABCD4O14678 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.18■□□□□ 0.34
ABCD4O14678 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ABCD4O14678 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ABCD4O14678 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ABCD4O14678 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ABCD4O14678 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ABCD4O14678 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.18■□□□□ 0.34
ABCD4O14678 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ABCD4O14678 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ABCD4O14678 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
ABCD4O14678 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ABCD4O14678 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.18■□□□□ 0.34
ABCD4O14678 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
ABCD4O14678 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.18■□□□□ 0.34
ABCD4O14678 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.18■□□□□ 0.34
ABCD4O14678 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.18■□□□□ 0.34
ABCD4O14678 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.18■□□□□ 0.34
ABCD4O14678 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.18■□□□□ 0.34
ABCD4O14678 AL049637.2-201ENST00000641778 930 ntBASIC17.18■□□□□ 0.34
ABCD4O14678 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ABCD4O14678 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.18■□□□□ 0.34
ABCD4O14678 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ABCD4O14678 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
ABCD4O14678 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.18■□□□□ 0.34
ABCD4O14678 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ABCD4O14678 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ABCD4O14678 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ABCD4O14678 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ABCD4O14678 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCD4O14678 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ABCD4O14678 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
ABCD4O14678 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ABCD4O14678 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCD4O14678 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.17■□□□□ 0.34
ABCD4O14678 KRT16P5-201ENST00000455284 522 ntBASIC17.17■□□□□ 0.34
ABCD4O14678 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
ABCD4O14678 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.17■□□□□ 0.34
ABCD4O14678 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.17■□□□□ 0.34
ABCD4O14678 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.17■□□□□ 0.34
ABCD4O14678 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ABCD4O14678 AC004264.1-201ENST00000608354 794 ntBASIC17.17■□□□□ 0.34
ABCD4O14678 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCD4O14678 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.17■□□□□ 0.34
ABCD4O14678 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCD4O14678 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
ABCD4O14678 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ABCD4O14678 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.16■□□□□ 0.34
ABCD4O14678 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ABCD4O14678 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms