Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TNFRSF11BO00300 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
TNFRSF11BO00300 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18■□□□□ 0.47
TNFRSF11BO00300 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18■□□□□ 0.47
TNFRSF11BO00300 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18■□□□□ 0.47
TNFRSF11BO00300 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.99■□□□□ 0.47
TNFRSF11BO00300 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 AL049812.1-201ENST00000432563 2267 ntBASIC17.98■□□□□ 0.47
TNFRSF11BO00300 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 AC068338.2-201ENST00000563278 1430 ntBASIC17.98■□□□□ 0.47
TNFRSF11BO00300 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TNFRSF11BO00300 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 AC006333.2-201ENST00000607957 2099 ntBASIC17.97■□□□□ 0.47
TNFRSF11BO00300 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 TEX21P-204ENST00000641479 1693 ntBASIC17.97■□□□□ 0.47
TNFRSF11BO00300 AC018553.1-201ENST00000616682 1458 ntBASIC17.97■□□□□ 0.47
TNFRSF11BO00300 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 AL355472.2-201ENST00000422958 438 ntBASIC17.97■□□□□ 0.47
TNFRSF11BO00300 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 C2orf69P4-201ENST00000565394 541 ntBASIC17.97■□□□□ 0.47
TNFRSF11BO00300 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 AC141586.3-201ENST00000562166 1838 ntBASIC17.97■□□□□ 0.47
TNFRSF11BO00300 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TNFRSF11BO00300 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms