Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 FLJ38576-201ENST00000623820 2459 ntBASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 AC011676.5-201ENST00000624864 2660 ntBASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 AL645608.8-201ENST00000606034 2086 ntBASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 NKILA-202ENST00000614771 2598 ntBASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.02■□□□□ 0.32
BOLA2-SMG1P6H3BVE0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.02■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 AL161938.1-201ENST00000569833 2180 ntBASIC17.02■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.02■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.02■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC17.02■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 UBALD1-205ENST00000590891 2641 ntBASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 AL033527.3-201ENST00000566366 1196 ntBASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 THA1P-201ENST00000590384 1145 ntBASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17■□□□□ 0.31
BOLA2-SMG1P6H3BVE0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms