Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AL049812.1-201ENST00000432563 2267 ntBASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 ZNF815P-204ENST00000434898 1737 ntBASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
TRIM49BA6NDI0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.45■■□□□ 1.03
TRIM49BA6NDI0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
TRIM49BA6NDI0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TRIM49BA6NDI0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 AC093503.3-201ENST00000624917 2352 ntBASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 AL121906.2-201ENST00000621597 723 ntBASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM49BA6NDI0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 AL355802.2-201ENST00000402069 882 ntBASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 AP006587.1-201ENST00000534129 1502 ntBASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM49BA6NDI0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 AL161938.1-201ENST00000569833 2180 ntBASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 SDHAP1-207ENST00000440850 2000 ntBASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM49BA6NDI0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 HLA-L-209ENST00000420110 1011 ntBASIC21.42■■□□□ 1.02
TRIM49BA6NDI0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms